Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0861 ATGAGTAACATACCATCAAACCTGTTACCCGGTGATGCAAGCCCAGAGTGGATCAATGGAGGTGACAACACGTGGCAGCTGACGTCAGCAACTCTGGTGGGCCTGCAAAGCGTTCCGGGCCTGGTGATCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCTTTGAACTCGGCGTTCATGGCACTCTACGCTTTTGCGGCGGTTGTGGTGTGTTGGGTTGGTTGGTGCTACCAAATGTCGTTCGGCGAGGGGATCCTTCCGTTTCTGGGACAGCCAAACGCGGCCTTGGACCGGGAATTCCTTTTCCGCCGGGCTTTTGCTGGGGATTTTCCGAACGCCACCATGGTGTACTTTCAGTTGGTTTTTGCCGCCATCACGTTGATTCTCATAGCGGGGGCGTTGCTTGGGAGAATGAACTTTCTGGCGTGGATGTTGTTTGTTCCGCTGTGGCTCACGTTCTCTTACACCGTTTGTGCCTTCAGTATATGGAGCCCCGAAGGATGGTTGTCCAGGATGGGCCTTATTGATTACTCCGGTGTGGTGCAAGGTTGGGCAGCAATAATAATGGGAATGATGTCCGGAAGCATCCCATGGTACACAATGATGGTGCTGCACAAAGAAAGCAAACTCCTGAAACAAGTGGATGACACTTTAGCAGTTTTCCACACCCACGCCGTGGCTGGTAGCTTAGGCGGCATTCTGGCCGGTTTCTTTGCAGACCCAAAGCTATGTCGTCTCTTCTACGGGACACAAGACTGGGATGAGCGATACACCGGCCTCGCCGTAGGCGTCTTCACGGGGAGGCCCAGGGCGGGGCTCAGGCAAATGGGGGTTCAGCTTCTTGGCATTGTGTTTGTCATACTCCTCAATGTCGCCACAACTAGCGTTGTGTGTTTGCTGGTTAGGGTTATAGTTCCACTGAGGATGAGTGAAGATGACTTGAAAGATGGGGATGATGCGGTGCATGGAGAGGTTGCGTATGCGTTGTGGGGCGATGGAGAGAAGCTTCAGACTCCGACTCCTACTGCGGCTGCGACGGAGGCTTTGGCTTTGGCTTTTGAAAAGAATCATGAATGGCCAACTGTGGAAGTACTCAAAACTTCGACTGATACTATTGCTCAATTGGAATGA 1131 0.5252 MSNIPSNLLPGDASPEWINGGDNTWQLTSATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVVVCWVGWCYQMSFGEGILPFLGQPNAALDREFLFRRAFAGDFPNATMVYFQLVFAAITLILIAGALLGRMNFLAWMLFVPLWLTFSYTVCAFSIWSPEGWLSRMGLIDYSGVVQGWAAIIMGMMSGSIPWYTMMVLHKESKLLKQVDDTLAVFHTHAVAGSLGGILAGFFADPKLCRLFYGTQDWDERYTGLAVGVFTGRPRAGLRQMGVQLLGIVFVILLNVATTSVVCLLVRVIVPLRMSEDDLKDGDDAVHGEVAYALWGDGEKLQTPTPTAAATEALALAFEKNHEWPTVEVLKTSTDTIAQLE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0861 376 SUPERFAMILY Ammonium transporter 17 179 - -
Aed8g0861 376 Pfam Ammonium Transporter Family 25 179 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed8g0861 376 Pfam Ammonium Transporter Family 179 327 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed8g0861 376 PANTHER AMMONIUM TRANSPORTER MEP2 179 341 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed8g0861 376 PANTHER AMMONIUM TRANSPORTER MEP2 4 179 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed8g0861 376 SUPERFAMILY Ammonium transporter 179 309 - -
Aed8g0861 376 Gene3D Ammonium transporter AmtB like domains 181 330 IPR029020 -
Aed8g0861 376 Gene3D Ammonium transporter AmtB like domains 10 180 IPR029020 -
Aed8g0861 376 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 179 341 - -
Aed8g0861 376 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 4 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0861 Aed-Chr8 7335036 7336711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0861 173 358 Inorganic Solute Cotransporters AT2G38290 47.312 2.11e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0861 K03320 - gmx:112999382 330.872