Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0839 ATGGGGAGTAGTGTAGATTATGATCATGAGTACCCTTCGAACGTTGAGAGAGTAGTGCATCATCATCATGAAGTGGAGGTTCCACCGCCTCAGCCGTTTTTGAAGTCTCTGAAGTACTCTCTGAAGGAGACTTTCTTCCCCGATGACCCTCTGAGGCAGTTCAAGAACAAGTCAGCTTCTAAGAAGATCATGCTTGGCCTTCAGTTCTTCTTCCCCATCTTCGAATGGGCTCCCAAGTACACCTTCCAGTTCTTGAAATCTGACCTCATTGCTGGCATCACCATCGCCAGCTTGGCCATTCCTCAAGGCATCAGCTATGCCAAACTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCGTTGATATATGCGATGATGGGAAGCTCGAGGGATTTGGCGGTGGGGACTGTGGCGGTTGGATCGCTTCTGATGGGTTCTATGCTGAGTGACGCGGTTGATCCAATTCAAGATCCTAAGCTTTACCTGCACCTTGCATTCACTGCTACATTATTTGCTGGAGTTTTTCAAGCTGCCTTGGGTCTGTTTAGGTTGGGGTTAATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTGTGTCTGCAGCAACTAAAATCGATTCTTGGCCTTGTTAATTTCACCCATGGAGCTGATATCATTTCAGTTATGCGCTCTGTTTTCACCCAAACTCATCAGTGGAGGTGGGAAAGCGCTGTGTTAGGATTTGTCTTCATTTTCTTCCTCCTTAGCACAAGATACTTCAGCAAAAAACGACCAAGGTTTTTTTGGGTGTCAGCAATGGCGCCGTTGACGTCCGTTATATTGGGAAGTCTATTGGTTTATTTCACTCACGCCGAGAAGCACGGTGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTAAATCCAGAATCAGTGACAAATCTGGTGTTTGTGTCGCCATACATGGCCACAGCTGTCAAAACAGGCATTGTCGTTGGCATTATATCGCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGCTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGATCAGCCGTGAACTATAATGCAGGATGCAAGACAGCAGCTTCCAACATTATAATGTCAATTGCAGTAATGTTGACATTGTTATTCCTAACACCGTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATTATTGTATCTGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATCCATCTATTTAAGGTTGACAAATTTGACTTTGTCGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCTATTGCCATATCTGTACTTCGGGTACTTCTATTTATTGCAAGGCCAAGGACATCTGTTTTGGGCAACATTCCAAATTCTATGATATATAGAAATGTTGAGCACTATCCAAATGCAAAACATGAAGAAAGAATCAAAGCTATAGGGGAGACTAGTTTGCAGTATGTTATAATTGATATGAGTGCCGTTGGAAACATTGATACAAGTGGGATAAGTATGCTTGAAGAGGTCAAGAAGATTACTGAGAGAAGAGAGCTACAATTCCAAGATCATTTAGGGGAGAAATGGATCTATCTGACTGTTGAAGAAGCCGTTGGAGCATGCAACTTCAATCTCCATGCTAGCAAAGTGAATCCTAAGAAAGATGAATCAGGGGGTTGGAACAATGTGTGA 1836 0.439 MGSSVDYDHEYPSNVERVVHHHHEVEVPPPQPFLKSLKYSLKETFFPDDPLRQFKNKSASKKIMLGLQFFFPIFEWAPKYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDAVDPIQDPKLYLHLAFTATLFAGVFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVNFTHGADIISVMRSVFTQTHQWRWESAVLGFVFIFFLLSTRYFSKKRPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPESVTNLVFVSPYMATAVKTGIVVGIISLAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLFKVDKFDFVVCMSAYIGVVFGSVEIGLVIAIAISVLRVLLFIARPRTSVLGNIPNSMIYRNVEHYPNAKHEERIKAIGETSLQYVIIDMSAVGNIDTSGISMLEEVKKITERRELQFQDHLGEKWIYLTVEEAVGACNFNLHASKVNPKKDESGGWNNV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0839 611 PANTHER SULFATE TRANSPORTER 522 609 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed8g0839 611 ProSiteProfiles STAS domain profile. 527 569 IPR002645 -
Aed8g0839 611 SUPERFAMILY SpoIIaa-like 523 589 IPR036513 -
Aed8g0839 611 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Aed8g0839 611 Pfam Sulfate permease family 85 465 IPR011547 GO:0016021
Aed8g0839 611 PANTHER SLC26A/SULP TRANSPORTER-RELATED 3 522 - -
Aed8g0839 611 PANTHER SULFATE TRANSPORTER 3 522 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed8g0839 611 Gene3D STAS domain 496 594 IPR036513 -
Aed8g0839 611 Pfam STAS domain 527 568 IPR002645 -
Aed8g0839 611 PANTHER SLC26A/SULP TRANSPORTER-RELATED 522 609 - -
Aed8g0839 611 TIGRFAM sulP: sulfate permease 72 523 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0839 Aed-Chr8 7102090 7108388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0839 21 611 Inorganic Solute Cotransporters AT4G02700 62.150 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0839 K17471 - gmx:100810196 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0839 8 7102090 7108388 Aed8g0839 8 7102090 7108388 ECH
Aed4g0240 4 1735852 1742246 Aed8g0839 8 7102090 7108388 PCT