Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0824 ATGTCAAGCACAAGAAATATGAGGCAGCACCTCAACTTGAACTTGAACATGTGTTGTTCAAATTCAGGTACTCCGGAATATGAATCTCCTCCATTGAGCCCCATAAGTAGTTCCTCACATCGCAATAACAACATCACTCAATTTCCTTCTCCTTCTTCAAACATCATGATAAAGAACTTCAACTCTATCTATGACCCTACTACTTTAACCTCTGACCACTCTTTCAACTCCACCACCATCCTCTTCGAGCCCGAACCCGAGCCGGCGGCGGACTTTGCCACCGCCTTTGCTTCACAACGCTTCTTCTTCTCCTCCCCAGGTCTCTCCAACTCCCTTGTTGACGAGAAGCTGAAGGAGGAGGAGAAGAAGGCGTTGTTGTTTAAGGGGAGCGTGGCGGTGGCAACCTATTCGCCAGATCCTTATGTGGATTTCCGGCGGTCAATGCAGGAGATGGTGGAGGCACGGCCAGAGCTGATGGACGTGAAGTCCAATTGGAGCGTCTTGCACGAGCTCCTCCTATGCTATCTTGCGCTCAACCCGAAGAACACCCACAACAGTGAAAATAGTGACAAGTCCATATCAATAAACAATTACAACTCCTTACTTAATATGTTTGATTGCGTAGAATCGATGCATCACAACAATGAGTGA 651 0.4731 MSSTRNMRQHLNLNLNMCCSNSGTPEYESPPLSPISSSSHRNNNITQFPSPSSNIMIKNFNSIYDPTTLTSDHSFNSTTILFEPEPEPAADFATAFASQRFFFSSPGLSNSLVDEKLKEEEKKALLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWSVLHELLLCYLALNPKNTHNSENSDKSISINNYNSLLNMFDCVESMHHNNE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0824 216 ProSiteProfiles OVATE domain profile. 133 197 IPR006458 -
Aed8g0824 216 Pfam Transcriptional repressor, ovate 137 185 IPR006458 -
Aed8g0824 216 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 185 IPR006458 -
Aed8g0824 216 MobiDBLite consensus disorder prediction 24 48 - -
Aed8g0824 216 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 184 IPR038933 GO:0045892
Aed8g0824 216 PANTHER TRANSCRIPTION REPRESSOR OFP12 7 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0824 Aed-Chr8 7004433 7006522 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed8g0824 Ovate 8.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0824 - - gmx:102663296 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0253 4 1840449 1841944 Aed8g0824 8 7004433 7006522 PCT