Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0823 ATGAGAGAGGGGCTGAGATCGCGGACCCGGCTGGGGACTGTTTCTGGTGTCGAAGCTGTTGTTAAGAGGAAAAAGAAGGTTGCTGTTAAGAGTGAGGCTGTTGAGTTGGATGATGAGGGTTTGGAGGCACAGAAATCAACGATTGAGAAGAAGAAGAAGAAGGGTGAAGTTGAGCGTGGTGTGAAACAAGAATGTGGCTTTGATTTGAATGTGAGACCGAGTGTGGACGTTGACTTAGCTGAGGATGGGGTTAGCATTGTAGTAGCTGAGGAAGATAGGAAGGCAAAGAAGGAGCGAGGCTCAAAAGATGAAGTATTTGTGGTTGGTGGTCGAGTGTTGCGCTCTAGGACGAAGAGGGAGGATGGTAAAAGATTGTATTATGGAGAGAATGATGATGGAGAAGATATTGGCGGTGAGAGGGTGAAAGTTAAGAAGGAATGTGTAGAAGCTGACGAAATTTTGGCCGACAGTTGCGAGAAGGAAGTGGTTAGGGTCGAGAAAGAAGGGAATGACACGAGGAAATTGAAACGGAAGCGCGGGAGGCCTCGCAAGATAAAATTGGAAGAGGAAGATCAGTCAGTTGGTGAGTTGCCACGTAAACGCGGAAGACCCCCCCTGCTGGCTGGCCGACAAAACCATCTCGCCACTGTGGTGGCACATAATAGAAAAGGAAAGGTGGCCCTTCGAAAAGGTAAAAAAGGTTTAATTAGGAGAGGTGGTGCTAAAGTGAATGCCATTGATAATACAATTTCAAGCAAGTTTGCTAGGGTTGAGGTAGAGCAGAAGGAGGTTTCTCATGTCGCAAAGAGTACAGTAAAGCAGTTAGTGAGGGATCAAATTAAGGAAAAACTCTCAGCTGCAGGATGGACAGTTGACTATAGACCCAGGAATGGCAGAGAGTACCATGATGCAGTGTATGTTAGTCTGGATGGACATACACACTGGTCAATCACCTTGGCCTACAAAAGGCTTAAAGAGTATTATGAAGCTGGTAATGGTGAAGGTAAGGCATATAGGCCAGGCTTCAAATTTACACCAATACTAGAAGAGGATTTCAAAATGCTAACTAAGGTAATTAACAAGCAAAGAAAAAAGAAAGATATATTGGTACAAAAGGGTGGAAAGAAAGTTGATGAAGTCAATGGTAAAAAGAACAAAGAAAGGTCAGGTTCTGGTGCAGGCATGGGTAAGTCAATGAAGGGAAAAAGGAAAACATCACCTAACAGGATGCCAGTTGTGAGGGATCATAAACGACAAAAAACACAAAACAAGAAGCGAAGTGCTCCATTGGTTCGCAATGCTGAGGAGATAGATTCAGAAACTGAGGGATATTTACTGTACAGCGGAAAACGAACATTGCTTGCCTGGATGATTGATTTGGGCACAGTCCTTCAAAATGGGAAGGTACATTATATGGCAGACAAAAGTAAAAGTGCGGTACTGGATGGTGTGATTACAGGAAATGGCATTCATTGTGTCTGCTGTGATAAAATCTTTACAATTTCAGACTTTGAAGTTCATGCAGGAAGCAAACTTGCTGATCCACTTAAAAATGTATATGTTGAGGAAGGAAGCTCCCTTTTACAATGCTTGCTAGATTCATGGAATAAACAAGATGAATCTGAACGTAAAAGTTTTCATTTTGTTGATGTTGCGGGTGAAGATCCAAATGATGATACATGTGGGGTCTGTGGAGATGGTGGAGACCTGATATGTTGTGATGGTTGCCCATCGACATTCCATCAAGGCTGCTTGGATATAAAAGAATTCATTATTAGAAAACTTGAGATTGATATGCCTGTAACGTTTTGTGAGAAAAGTTTCCATCTGGTGACTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGGATCACAGATCCTGTATTGAGGCAAATGATGCCAATACTGATGATTCCAGGGATGTCTTCTTTTGTGGAAACAGATGTCAAGAGTTATCTGAGGGACTTGAAAGGCTCCTAGGGGTTAAACATGAAATTGAAGATGGATATTCTTGGACTTTTATTCGACGGTCAGATGTGGGCTTTGATGCTTCTCAGATAAAACATCAGATGGTTGAATGTAATTCTAAGCTGGCTGTTGCAATATCAATAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGAATCAATCTGATCCACAGTATTCTGTATAATCGTGGGTCAAATTTCAATCGTCTGAACTATAGTGGATTTGTTACTGCAATTCTAGAGAGTGGTGATGAGATCATCGCTGCTGCATCTATCAGGATCCGTGGGAACCAACTAGCAGAGATGCCATTTATTGGTACCCGCTATATGTACAGGAGACAAGGAATGTGCCGCCGGCTTCTAAATGCCATTGAATGGGGACTCAGCTCTTTAAATGTTGAGTCATTGGTCATACCAGCTATCTCAGAACTCAGAGAAACTTGGACTTCTGTTTTTGGGTTTGAACCACTTGAATCAACAAGCAAGCAAATATTACGTAATAAGAATCTGTTGGTATTTCCTCATGTAGATATGTTACAGAAGAAGATATCAAAACATAAATTGGCTGATCAAAATCTGATTCCTTCAGAAGCTTTCAATCTTAAAAGGAATCAAGTAGCAAATAATTGTGATGGAGTGGGCTCATCCGGATCTGATGTGATCAATTATACTGATATTGCTCCCTCTAATGCATGCCAGTCAAATGATGAAACCATATCGATTGAATCTGGTTGTCATCTTCCTGAGGGTTCATTGAATAATGTACCTGACATTGCGATAAATGCTAAAGATCATAGGGAATTTTCAAAAGATGACACTTGTCAAGTTGTATGTCAGGCAGTTCCTGAAAATTTGGTGATGGAAGACAACAATATTGAAAATGCCTGTGAATATGTGACTGATACCTGTTGCCGAACTGGAGATAGCCAGTTGAACAATTGCCAGGTTCCTTATGAGGAGAGACTGTCTCTTACGTCCTGTACTATCACTGAGGCTACAGAAGGACCCTGTCATGTTCCGTTAGAGGTTACAGAAGGACCTTGTGTTAGTGTTTCGTTGGAGGTTACTGAAAACTTTCCCAATCAGATCAAAGTAGCAAATGAAGATATTTCAAATAACAGTGCTGAAAATTCTGCACCCTGTGGTGCAGAAAGAATTCCTCTTGACTCACAAATTGTGTTTGATACAAGGGATTCAAAAGATTCCGCTGATTCTAATCACCAGGATTCATATAAGGTTTCTGACAGTTGTGAACTGAGAAGCAAGAGTGACTGTGGTGAACCGAATTCTATAGGAACAGAAGATGTACACGCTGAATCTGTTGGTGTTTGTTGTTTTCATTCTAGACCCAAGGGTGATTGTGCCTCTTGTGAGGCTGCTTCTGCAACCAACGTCTTAATGCACATAAGATCACAGAACATCACCAATAATAAGCCTTGGATGAAAGGGGCTTCAGAGTTAGCTGAGCCTGATTTGCAGGTTGATCAAACTGCACGCAACAATGCTCCCTCCCTGTGGAGCCCAAACACTGCTTCTGGTGCGGCTCTTCACTGTGCATCTTCTGGCACTGCTTCGCGTGGCAGTACTGAGGGGATAGTTTTGTCAAACCAAGCGAGTTGA 3618 0.4204 MREGLRSRTRLGTVSGVEAVVKRKKKVAVKSEAVELDDEGLEAQKSTIEKKKKKGEVERGVKQECGFDLNVRPSVDVDLAEDGVSIVVAEEDRKAKKERGSKDEVFVVGGRVLRSRTKREDGKRLYYGENDDGEDIGGERVKVKKECVEADEILADSCEKEVVRVEKEGNDTRKLKRKRGRPRKIKLEEEDQSVGELPRKRGRPPLLAGRQNHLATVVAHNRKGKVALRKGKKGLIRRGGAKVNAIDNTISSKFARVEVEQKEVSHVAKSTVKQLVRDQIKEKLSAAGWTVDYRPRNGREYHDAVYVSLDGHTHWSITLAYKRLKEYYEAGNGEGKAYRPGFKFTPILEEDFKMLTKVINKQRKKKDILVQKGGKKVDEVNGKKNKERSGSGAGMGKSMKGKRKTSPNRMPVVRDHKRQKTQNKKRSAPLVRNAEEIDSETEGYLLYSGKRTLLAWMIDLGTVLQNGKVHYMADKSKSAVLDGVITGNGIHCVCCDKIFTISDFEVHAGSKLADPLKNVYVEEGSSLLQCLLDSWNKQDESERKSFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQGCLDIKEFIIRKLEIDMPVTFCEKSFHLVTGTAFIAVANFVDHRSCIEANDANTDDSRDVFFCGNRCQELSEGLERLLGVKHEIEDGYSWTFIRRSDVGFDASQIKHQMVECNSKLAVAISIMDECFMPYIDHRSGINLIHSILYNRGSNFNRLNYSGFVTAILESGDEIIAAASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLNAIEWGLSSLNVESLVIPAISELRETWTSVFGFEPLESTSKQILRNKNLLVFPHVDMLQKKISKHKLADQNLIPSEAFNLKRNQVANNCDGVGSSGSDVINYTDIAPSNACQSNDETISIESGCHLPEGSLNNVPDIAINAKDHREFSKDDTCQVVCQAVPENLVMEDNNIENACEYVTDTCCRTGDSQLNNCQVPYEERLSLTSCTITEATEGPCHVPLEVTEGPCVSVSLEVTENFPNQIKVANEDISNNSAENSAPCGAERIPLDSQIVFDTRDSKDSADSNHQDSYKVSDSCELRSKSDCGEPNSIGTEDVHAESVGVCCFHSRPKGDCASCEAASATNVLMHIRSQNITNNKPWMKGASELAEPDLQVDQTARNNAPSLWSPNTASGAALHCASSGTASRGSTEGIVLSNQAS 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0823 1205 MobiDBLite consensus disorder prediction 183 198 - -
Aed8g0823 1205 Pfam Tify domain binding domain 483 532 IPR032308 -
Aed8g0823 1205 PANTHER PHD FINGER PROTEIN 12 625 1154 IPR042163 GO:0003714|GO:0045892
Aed8g0823 1205 MobiDBLite consensus disorder prediction 374 430 - -
Aed8g0823 1205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 550 665 IPR013083 -
Aed8g0823 1205 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 251 590 - -
Aed8g0823 1205 MobiDBLite consensus disorder prediction 168 207 - -
Aed8g0823 1205 SUPERFAMILY FYVE/PHD zinc finger 549 590 IPR011011 -
Aed8g0823 1205 MobiDBLite consensus disorder prediction 1184 1205 - -
Aed8g0823 1205 MobiDBLite consensus disorder prediction 1063 1094 - -
Aed8g0823 1205 MobiDBLite consensus disorder prediction 1063 1088 - -
Aed8g0823 1205 SMART PHD_3 560 608 IPR001965 -
Aed8g0823 1205 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 625 1154 - -
Aed8g0823 1205 PANTHER PHD FINGER PROTEIN 12 251 590 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0823 Aed-Chr8 6995094 7003168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0823 171 856 PHD Transcription Factor Family AT5G36670 42.222 1.09e-172 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0823 - - gmx:100784172 1744.94