Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0798 ATGTGCAGACTAAGACAACCCATAATAAACGTTCCTTGCAGTGGGAAAAGATTGAGTGTGAAGCAAATTGAGAAAGAGAAAATAGTTGTCGTAATGGGAGCCACGGGAACAGGGAAGTCAAGGCTGTCCGTTGACCTCGCCACGTGTTTCCCATCAGAAATCATAAACTCCGACAAAATCCAAGCCTACGAGGGTCTCGACATAGTCACAAACAAAATCTCCAAGGAAGACCAACGCTGCGTGCCGCACCACTTACTAGGAACAATAAACCCCGACAGAGACTTCACGGTCAACGACTTCCGCGACATCACGTCAGCATCCGTTGACTCGATCACGCGGCGCGAGCGGCTTCCAATCATCGTTGGCGGCTCCAACTCGTATCTCGAGGCGTTGATCGACGACGACGATTACAAGTTCAGGTCGCGATACGATTTTCTTTGCCTCTGGGTCGACGTGGCAATGCCCGAGCTTCAGTCCTACGTGGCGGAGCGCGTGGACGAGATGCTCCGTAACGGAATGGTGGAGGAGTTGAGACCGTTTTATAGTCCCAACCGCGATTACTCGCGAGGTGTAAGAAGGGCAATTGGGGTTCCCGAATTCGACGAGTATTTTCGGAGGGAACTGGAGTTTGTTGAGGACGATGAGACAAAGCAGAGGTTGTTGGAAAAGGCGGTTAGGGAAATGAAATTGAACACGTGCAAGCTGGCGATGAAGCAGTTGGGGAAGATTCGGAGGCTGAGGAACGTTAAGAGTTGGGAGATACATCGCGTGGACGCCACGCCCGTGTTTCGAATGCGTGGGGAATTAGAAGCCAACGAGGCGTGGAAGAAGCTGGTGGCAGAGCCTAGTGCTATGATCGTTGCTCGCTTTCTCTATAACTCCAACATAAATAATAGTGCCAACGTTGTTTCAGTGAAACCAGCAGCTTCAGAGAGTGTTCTGGCTGCGGCAACGTGCTAA 960 0.5115 MCRLRQPIINVPCSGKRLSVKQIEKEKIVVVMGATGTGKSRLSVDLATCFPSEIINSDKIQAYEGLDIVTNKISKEDQRCVPHHLLGTINPDRDFTVNDFRDITSASVDSITRRERLPIIVGGSNSYLEALIDDDDYKFRSRYDFLCLWVDVAMPELQSYVAERVDEMLRNGMVEELRPFYSPNRDYSRGVRRAIGVPEFDEYFRRELEFVEDDETKQRLLEKAVREMKLNTCKLAMKQLGKIRRLRNVKSWEIHRVDATPVFRMRGELEANEAWKKLVAEPSAMIVARFLYNSNINNSANVVSVKPAASESVLAAATC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0798 319 Pfam IPP transferase 139 244 - -
Aed8g0798 319 Pfam IPP transferase 61 134 - -
Aed8g0798 319 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 154 254 - -
Aed8g0798 319 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 298 IPR039657 -
Aed8g0798 319 Gene3D - 25 291 IPR027417 -
Aed8g0798 319 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 20 298 - -
Aed8g0798 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0798 Aed-Chr8 6811400 6812359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0798 141 291 C2H2 Transcription Factor Family AT2G27760 31.638 9.74e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0798 K10760 - gmx:100803964 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0798 8 6811400 6812359 Aed8g0798 8 6811400 6812359 ECH
Aed4g0301 4 2175944 2178794 Aed8g0798 8 6811400 6812359 PCT