Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0788 ATGAATATGATTCCTTGGGGTGGCCTCAGTTGCTGTTTGAGTGCCGCTGCTCTTTACCTTCTCGGCAGAAGCAGTGGCAGGGATGCGGAAATTCTTAAATCCGTTACGAGGGTCAATCAATTGAAGGAACTAGCTCAACTGTTAGATGCGGAAATATTACCCTTCATTGTGACAATTTCTGGAAGAGTTAGCGCTGAAACCCCTATTAACTGCGAGTTCAGTGGTTTAAGAGGTGTAATTGTTGAAGAAACAGCAGAGCAACATTTTCTCAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTGATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGACTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCTACTGGTTTTGTATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCGGGTCGGTCACTTGTACGTGGAACTTTGGATTATCTGCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCAGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGACTATTCGAATTCAGAGACCCCACAAAGGGCCATTTTATGTCTCTCCCAAAACAATGGATCAACTAATTGCAAATCTGGGGAAATGGGCAAGGTGGTATAAGTATGCTTCTGTGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCCAAGCATGCTATTCGGTACATATTGGAAAGACGGCGCCGCAGCGAACTTCAAAGAAGGGTTCTTGCTGCAGCTGCAAAGAAGCCGGGACAAAATAATGATGTTGAAAAGGCTGACAACTTATCAGATGGTGCTAAAAGAGATCGCTTAATGCCAGATTTGTGTGTAATATGCCTTGAGCAGGAATATAATGCTGTGTGGGCATATGTGCTGCTGTACAGCTTGTTCTTCACACTTGACCAATTGTCCTCTCTGCCGGAGACAGATAGAGAAGGCTGTGAAGACATTCCGTCATTGAGTATTGAGCATACACGGTAG 1035 0.4483 MNMIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPFIVTISGRVSAETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTDRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPHKGPFYVSPKTMDQLIANLGKWARWYKYASVGLTVFGAYLIAKHAIRYILERRRRSELQRRVLAAAAKKPGQNNDVEKADNLSDGAKRDRLMPDLCVICLEQEYNAVWAYVLLYSLFFTLDQLSSLPETDREGCEDIPSLSIEHTR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0788 344 Pfam E3 Ubiquitin ligase 87 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Aed8g0788 344 PANTHER - 3 306 IPR044231 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0788 3 267 C3H Transcription Factor Family AT1G63900 78.652 8.92e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0788 K15688 - gmx:100803252 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0788 8 6721819 6726108 Aed8g0788 8 6721819 6726108 ECH