Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0777 ATGATCCACATGAATCTCTCTCTTGTTTTTCTCTTCCTCTTCCTCGCCCTTCCTCTTCTATCGCTATGCGACGACACGTGTCCCTTAAACTTCACGATCCTGGGCAGCAGGAAGCCCTCCTCCTTCGACACATCTCGGTGCCAGGTCATCAGCCAGGCCCTCCGCCTAGTGGAGTCGGACTACCTCCGGCGCAGCGGCTACTTCCTGCCGCCACTCAACGCCACCGTCTCATGCTGGCGGAGCTTCCAGTCCTACGTGAACCAATTCGACCCAACCTACAACATCAGCACCTCCTGCGGCTTCAACACCTCGTGGATCTCCCAAGGCTGCACCAACGTCACCACCAAACAAGACTTCGAAAGTTTAGTCTCTCCCTCAGCCCTCCAGAACATGCGAAAAAACTGCAACCAGTCGCTGGAGAATAACTCCCCATGCGCCCTCTGCACAACCTCCTTCTCCCTTCTACCAACCTTGGGAGTCTCCATCGGGAACCTCACCGACTGCAACGACTATGTTTCTATCTACGCCGCCGCCTTCGCCAACAGCTTCGGCCCCTCCGACCCCGGCACCGCCAAGTGTATCTTCTCAATCCAATTCTCCAATAACACTTCCTCCTCCGCCAAGAGAAAAACGGTTGTTATCGCGGTTGTCTCCGTCGTCTGTGTACTTGTCTTCATAATACTACTTGCTCTCGGCGCTTGGGTTTATTATTTCAAGCTGGAACACAAGCTTACCGGGGGTAACAATGTTTCTATCGCGGAAATCGGATTGGTCTCTGGGTTAGATTCCATGGAACAGAGCACAACGTTAATCAGATTCACCTTCGATGACATCAAGAAAGCAACTAAGAATTTCTCCAGAGACAACATAGTCGGGAGAGGCGGTTACGGGAATGTCTACAAAGGCTTGCTTCGCGACGGGAGCGAGGTTGCGTTTAAGAGGTTCAAGAACTGCGCAGCTTCCGGCGACGCAAGCTTCACTCACGAAGTTGAGGTTATTGCAAGTGTCAGACACGTCAACCTTGTTGCCCTGAGAGGCTATTGTTCCGTCACCACTCGTTTGGAAGGTTACCAGAGAATCATAGTTTGCGACATGGTGAAAAACGGGAGCCTCCACGACCATTTGGAGGGGAAAGCCTTGGATGTTATTGAAGATGGAATGCCAGAAAGGGGCACAGAGCAAGTTCTTGAGAAGTATGTGTTGATCGCTGTGCTTTGTTCTCATCCGCAGTTGTATGCTAGACCTACGATGGATCAGGTTGTTAAAATGATGGAGACTGATGAATCGGTTCCTTCGATACCTGAGAGGCCAATCTCTTTTGTTGCTGGGAGGCTTGATATTGAGAGATCTGTCAGTAGTTGTGGCTCTGGTCAGCTCTCTAGTCCAACGGGTTATCAATCGTTTACTATAGAAAGTGACCGACTTTCTTCTAATTCTAGGGATGAAAGAAGCTCAAGCTCTAGGATTTTGAGTACAGATTGA 1482 0.504 MIHMNLSLVFLFLFLALPLLSLCDDTCPLNFTILGSRKPSSFDTSRCQVISQALRLVESDYLRRSGYFLPPLNATVSCWRSFQSYVNQFDPTYNISTSCGFNTSWISQGCTNVTTKQDFESLVSPSALQNMRKNCNQSLENNSPCALCTTSFSLLPTLGVSIGNLTDCNDYVSIYAAAFANSFGPSDPGTAKCIFSIQFSNNTSSSAKRKTVVIAVVSVVCVLVFIILLALGAWVYYFKLEHKLTGGNNVSIAEIGLVSGLDSMEQSTTLIRFTFDDIKKATKNFSRDNIVGRGGYGNVYKGLLRDGSEVAFKRFKNCAASGDASFTHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLEGKALDVIEDGMPERGTEQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDESVPSIPERPISFVAGRLDIERSVSSCGSGQLSSPTGYQSFTIESDRLSSNSRDERSSSSRILSTD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0777 493 Pfam SPARK 25 153 IPR043891 -
Aed8g0777 493 ProSiteProfiles Protein kinase domain profile. 285 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0777 493 MobiDBLite consensus disorder prediction 452 474 - -
Aed8g0777 493 Gene3D Phosphorylase Kinase; domain 1 257 364 - -
Aed8g0777 493 Pfam Protein tyrosine and serine/threonine kinase 288 378 IPR001245 GO:0004672|GO:0006468
Aed8g0777 493 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Aed8g0777 493 PANTHER OS01G0253100 PROTEIN 15 376 IPR045271 GO:0004714|GO:0006468
Aed8g0777 493 PANTHER OS01G0253100 PROTEIN 377 479 IPR045271 GO:0004714|GO:0006468
Aed8g0777 493 SUPERFAMILY Protein kinase-like (PK-like) 261 381 IPR011009 -
Aed8g0777 493 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 377 479 - -
Aed8g0777 493 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 15 376 - -
Aed8g0777 493 MobiDBLite consensus disorder prediction 452 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0777 Aed-Chr8 6631909 6633795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0777 376 479 Receptor kinase-like Gene Family AT2G48010 65.094 3.44e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aed8g0777 PK_Tyr_Ser-Thr 1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0777 - - gmx:100800760 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0777 8 6631909 6633795 Aed8g0777 8 6631909 6633795 ECH
Aed4g0325 4 2334656 2336341 Aed8g0777 8 6631909 6633795 PCT