Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0776 ATGAAGGAAAAGGTGGATTCCCCAGTAACAGTCCTTGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCGAAAGAGCCTACAGCGGATTCTGAGTCACAAGAGCTTTCAAAACCTGCTTCTAGGTGGCATTCATTTCTTCAATTGTTGAGAAGCGGATCGAAGAAACAGACGACGAACACATTGCATCCTCTTAGTGTCCTCAAACTCTCCAAAAGAATGAGCACTAGCATGAGGGAGTCCATTCTCCCAAGTTGTCTCATGGATGCAACTGCTTCCCCGTGCAGGTCACCCTGGAAGATCTTCACCCATCATGAGATTCAGGCTGCAACCAATTCATTTAGCCAAGAAAATATGATTGGGAAGGGTGGCTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGTCAGCTAGTGGCAATTAAACGATTAACAAGAGGAACAGCTGATGAAATCATAGGAGATTTCTTATCAGAACTTGGCGTAATGGCGCATGTAAACCACACCAATACTGCTAAGCTGGTTGGTTATGGAGTGGATGGTGGAATGTATCTAGTTCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCAGTTCTTTATGGTTCCAAGGAGAAACTACCATGGTTTATTAGACACAAAATTGCATTAGGAGCAGCAAAGGGTATATTATATCTTCATGAGGGATGTCAAAGAAGAATTATCCACAGAGATATAAAAGCTGCTAATATCTTACTCACGGAGGACTTTGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTGCCAGAAAATTGGACTCACCACACCGTTTCAAAATTTGAAGGAACATTCGGCTACCTAGCACCTGAATACTTGCTGCATGGCATAGTAGACGAGAAAACGGACGTATTTGCCTTTGGTGTATTGCTATTAGAATTAGTGAGTGGGAGAAGAGCACTTGATTATTCACAGCAAAGCCTTGTGTTGTGGGTTGTACAGCTTCTGAATGGGAACCTTAGCTGCTTTAAGGGCATGAAGAAAACTAGAATGCCATTCTTCCGAAGAGTGTTTCGGGAAGAACTCCTTGATTCTGATGAATAG 1089 0.4252 MKEKVDSPVTVLEDYFRSSDSESSSSKEPTADSESQELSKPASRWHSFLQLLRSGSKKQTTNTLHPLSVLKLSKRMSTSMRESILPSCLMDATASPCRSPWKIFTHHEIQAATNSFSQENMIGKGGYAEVYKGCLPNRQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHTNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKLPWFIRHKIALGAAKGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWVVQLLNGNLSCFKGMKKTRMPFFRRVFREELLDSDE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0776 362 Pfam Protein kinase domain 117 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0776 362 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Aed8g0776 362 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 327 - -
Aed8g0776 362 Gene3D Phosphorylase Kinase; domain 1 90 190 - -
Aed8g0776 362 ProSiteProfiles Protein kinase domain profile. 116 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0776 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Aed8g0776 362 SUPERFAMILY Protein kinase-like (PK-like) 101 329 IPR011009 -
Aed8g0776 362 MobiDBLite consensus disorder prediction 14 41 - -
Aed8g0776 362 SMART serkin_6 116 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0776 362 MobiDBLite consensus disorder prediction 1 41 - -
Aed8g0776 362 PANTHER OS08G0249100 PROTEIN 1 327 - -
Aed8g0776 362 Gene3D Transferase(Phosphotransferase) domain 1 193 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0776 Aed-Chr8 6621416 6625443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0776 103 332 Trihelix Transcription Factor Family AT1G68690 43.882 5.39e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed8g0776 Pkinase 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0776 - - gmx:100780587 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0776 8 6621416 6625443 Aed2g2507 2 27757697 27766818 ECH
Aed8g0776 8 6621416 6625443 Aed8g1792 8 22731367 22733694 ECH
Aed8g0776 8 6621416 6625443 Aed8g0776 8 6621416 6625443 ECH
Aed4g1868 4 22751409 22759169 Aed8g0776 8 6621416 6625443 ECH
Aed4g0327 4 2346282 2348650 Aed8g0776 8 6621416 6625443 PCT