Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0771 ATGACATTCAAGCGCAGGAATGGAGGCCGCAACAAGCATGGCCGTGGCCACACCAAATTCATCAGGTGCTCCAATTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCTGTCAGAGACGTGCAGGAAGCCTGTGTCTATGAACAATATACTCTTCCGAAACTGTATGTGAAGATGCAGTACTGTGTATCCTGTGCTATCCACTCTCATGTTGTGAGAGTTCGATCCCGCATTGACAGGAGGAAGCGCGACCCTCCACAGCGTTTCATCAGGCGCAGGGATGATGCACCAAGGCCCGGTCAGCCTGGTGGTCAAGCACCCCGACCTGCTGGCACAGGACCACCACCTGTCCGAACCTAA 396 0.5404 MTFKRRNGGRNKHGRGHTKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRIDRRKRDPPQRFIRRRDDAPRPGQPGGQAPRPAGTGPPPVRT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0771 131 MobiDBLite consensus disorder prediction 114 131 - -
Aed8g0771 131 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Aed8g0771 131 PANTHER 40S RIBOSOMAL PROTEIN S26 1 131 - -
Aed8g0771 131 PANTHER 40S RIBOSOMAL PROTEIN S26 1 131 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aed8g0771 131 MobiDBLite consensus disorder prediction 88 131 - -
Aed8g0771 131 MobiDBLite consensus disorder prediction 90 110 - -
Aed8g0771 131 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aed8g0771 131 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0771 Aed-Chr8 6571765 6573745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0771 1 115 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 82.609 3.32e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0771 K02976 - gmx:100781822 199.519