Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0752 ATGAGTGGTTCTTCAAACTCAAAACAGAGAACATGCGACTACTGTGGGGACTTCACGGCTCTTCTGTATTGCAGAGCCGATTCTGCGAAGCTATGTTTCTTCTGTGACCGCAAAGTTCACTTCCCAAACCAGCTTTTCTCCAAGCACGCGCGCGCGCAGCTCTGTGACGTGTGTGGTGATTCGCCTGCCTCCGTGCTCTGTTTTTTTTCCGCAGAGGACTCTGTTCTGTGCCACAACTGTGACTGCGAAAGGAACCAACTTTCGGTAACTCAGGTGCACCAACGGAGACCCCTCGAGGGTTTCTCGGGTTGCCCCTCTGTGACTGAGTTGTTAGCAATTCTGGGTCTCACTGAAAAATCTCTGCTTTCAAATGAGGGTACTTCACAGATTGATGACCTTTTGGATTTGCACGTGTGGAGTGCTCCTTCTGTTAATGGTCTTGAAGATTTTATCACTTCTCATAAGTTGAATCAGAATCGTAAGGGTGCGTGCGGAAGACACAAAGAAGAGATTCTTAGTCAACTTCGTGAGCTAATAAAGTTGGAGCCAGAGTCGATTCATGTAGAAGTTGATGCTCAAGCTCAACGACAAGAAGTGCAATTTGTAAATTTGTCTACTGGCTTTGAACGTGACGTGGAGGCTACTATGTTTCCTTCATATGAGACAGGTGTGTTTTGTTGGCATGGAGAAAGCAATGATCCTAGGAATCAAATTGTTCCATCCGATACGTCGTCGTTGAGAGATTATGGCTTGGTAGTTTCAGCTAAAGATGAAAGTTTTACTATCCCCGAATCTAACAACGAAGGGAAACCATCAAATTCTTTTAACCCTCATCAAAACTTATCCCCTACTCCTAAAGCTACTACTACTACTCCATATGAATTGACAAGTCATGAAAGAGATTCAGCATTATTGCGATACAGAGAGAAGAAGAAAAACAGAAGATATGACAAGCACATCAGATATGAATCACGAAAAGTTCGGGCAGAAAGCAGATTGAGAATCAAGGGTCGGTTTGTCAAAGATGAAACACAAAAATAA 1041 0.4361 MSGSSNSKQRTCDYCGDFTALLYCRADSAKLCFFCDRKVHFPNQLFSKHARAQLCDVCGDSPASVLCFFSAEDSVLCHNCDCERNQLSVTQVHQRRPLEGFSGCPSVTELLAILGLTEKSLLSNEGTSQIDDLLDLHVWSAPSVNGLEDFITSHKLNQNRKGACGRHKEEILSQLRELIKLEPESIHVEVDAQAQRQEVQFVNLSTGFERDVEATMFPSYETGVFCWHGESNDPRNQIVPSDTSSLRDYGLVVSAKDESFTIPESNNEGKPSNSFNPHQNLSPTPKATTTTPYELTSHERDSALLRYREKKKNRRYDKHIRYESRKVRAESRLRIKGRFVKDETQK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0752 346 CDD Bbox1_BBX-like 12 54 - -
Aed8g0752 346 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Aed8g0752 346 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 343 - -
Aed8g0752 346 MobiDBLite consensus disorder prediction 260 301 - -
Aed8g0752 346 ProSiteProfiles CCT domain profile. 300 342 IPR010402 GO:0005515
Aed8g0752 346 MobiDBLite consensus disorder prediction 260 297 - -
Aed8g0752 346 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 13 7 343 - -
Aed8g0752 346 Pfam CCT motif 300 342 IPR010402 GO:0005515
Aed8g0752 346 SMART bboxneu5 7 54 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0752 Aed-Chr8 6448316 6451645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0752 8 315 C2C2-CO-like Transcription Factor Family AT2G47890 35.604 2.41e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed8g0752 CCT 2.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0752 - - gmx:100798117 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0752 8 6448316 6451645 Aed8g0752 8 6448316 6451645 ECH
Aed2g2171 2 25616308 25619443 Aed8g0752 8 6448316 6451645 PCT