Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0744 ATGGACTTGTACGGTCGGGGCCCCGCCAGAAACGGATCCAACCCGGTTAACCAACCCGAATGGCGCTCGCCGGGGGCCACCGACACTGCTCTCGAAGAATCGATGTGGCATTTAACTCTGGGCGGTGGTGGCGGCGGCGGCGAATATTACCCGGAGCGTCACGGCGTGCCGAATTGCGTCTATTACATGCGGACTGGGGTGTGTGGATATGGTGGCAGGTGTCGTTACAATCACCCTCGTGATCGTGCTGCGGTTGCTGCGGCGGTGAGAGTTACTGGGGACTACCCAGAACGGGTGGGGGAACCTCCATGTCAGTATGGAGGAGCTTCCTCGAGCTTGAGGGTGGCCAGGCCTCCTATGTTGCATGGTTCGTATGTGCAAGGGGCTTATGCTCCTGTACTCCTTTCCCCAGGGGTTGTTCAATTTCCTGGATGGAGTCATTATTCGGCACCTGTAAGTCCCGTGCCATCTCCTGGTGCTCAACCCGGTGTTGGGGCTACTTCTTTATATGGAGGGCTACAACCTTGTGCATTTTATCTGCAAAATGGGCATTGCAAGTTTGGCTCCACATGCAAATTTGACCATCCTTTGGGATCTATGAGATACAGTCCATCGGCATCGTCTCTCATTGATGTGCCAGTTACTCCATACCCAGTTGGGTCTTTGCTCTCTCAGTTGGCTCCGTCAACAACATCTTCCGACCTTCGGCCAGAACTGATGTCAGGGTCCAAAAAGGAATCATCCTTTTCAGCAAGAATACCTTCATCTGGAAATAGTTCTGCTACTTCTGTGGGTTTAATCTTCTCACAAGGCGGGTCTGTCTCGCTATCTGATGTGCAACTCTCAAGCCCGAGTTCCGCCCCTCTAAGCAGTAGCAGAAGCACCAGACAAAGCAGCGAGATACGTTGA 909 0.5347 MDLYGRGPARNGSNPVNQPEWRSPGATDTALEESMWHLTLGGGGGGGEYYPERHGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAVAAAVRVTGDYPERVGEPPCQYGGASSSLRVARPPMLHGSYVQGAYAPVLLSPGVVQFPGWSHYSAPVSPVPSPGAQPGVGATSLYGGLQPCAFYLQNGHCKFGSTCKFDHPLGSMRYSPSASSLIDVPVTPYPVGSLLSQLAPSTTSSDLRPELMSGSKKESSFSARIPSSGNSSATSVGLIFSQGGSVSLSDVQLSSPSSAPLSSSRSTRQSSEIR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0744 302 PANTHER PROTEIN PHOSPHATASE RELATED 114 171 - -
Aed8g0744 302 ProSiteProfiles Zinc finger C3H1-type profile. 53 81 IPR000571 GO:0046872
Aed8g0744 302 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 114 171 - -
Aed8g0744 302 Gene3D - 50 127 - -
Aed8g0744 302 Gene3D - 171 221 - -
Aed8g0744 302 SUPERFAMILY CCCH zinc finger 55 82 IPR036855 GO:0046872
Aed8g0744 302 SUPERFAMILY CCCH zinc finger 173 201 IPR036855 GO:0046872
Aed8g0744 302 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 174 196 IPR000571 GO:0046872
Aed8g0744 302 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 56 80 IPR000571 GO:0046872
Aed8g0744 302 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 18 107 - -
Aed8g0744 302 MobiDBLite consensus disorder prediction 1 27 - -
Aed8g0744 302 PANTHER PROTEIN PHOSPHATASE RELATED 18 107 - -
Aed8g0744 302 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 172 280 - -
Aed8g0744 302 PANTHER PROTEIN PHOSPHATASE RELATED 172 280 - -
Aed8g0744 302 MobiDBLite consensus disorder prediction 276 302 - -
Aed8g0744 302 SMART c3hfinal6 53 80 IPR000571 GO:0046872
Aed8g0744 302 SMART c3hfinal6 171 197 IPR000571 GO:0046872
Aed8g0744 302 MobiDBLite consensus disorder prediction 227 262 - -
Aed8g0744 302 ProSiteProfiles Zinc finger C3H1-type profile. 170 198 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0744 Aed-Chr8 6361224 6366006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0744 1 249 C2H2 Transcription Factor Family AT5G18550 36.220 1.42e-33 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed8g0744 zf-CCCH 2.4e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0744 - - gmx:100805017 221.476