Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed8g0744 | ATGGACTTGTACGGTCGGGGCCCCGCCAGAAACGGATCCAACCCGGTTAACCAACCCGAATGGCGCTCGCCGGGGGCCACCGACACTGCTCTCGAAGAATCGATGTGGCATTTAACTCTGGGCGGTGGTGGCGGCGGCGGCGAATATTACCCGGAGCGTCACGGCGTGCCGAATTGCGTCTATTACATGCGGACTGGGGTGTGTGGATATGGTGGCAGGTGTCGTTACAATCACCCTCGTGATCGTGCTGCGGTTGCTGCGGCGGTGAGAGTTACTGGGGACTACCCAGAACGGGTGGGGGAACCTCCATGTCAGTATGGAGGAGCTTCCTCGAGCTTGAGGGTGGCCAGGCCTCCTATGTTGCATGGTTCGTATGTGCAAGGGGCTTATGCTCCTGTACTCCTTTCCCCAGGGGTTGTTCAATTTCCTGGATGGAGTCATTATTCGGCACCTGTAAGTCCCGTGCCATCTCCTGGTGCTCAACCCGGTGTTGGGGCTACTTCTTTATATGGAGGGCTACAACCTTGTGCATTTTATCTGCAAAATGGGCATTGCAAGTTTGGCTCCACATGCAAATTTGACCATCCTTTGGGATCTATGAGATACAGTCCATCGGCATCGTCTCTCATTGATGTGCCAGTTACTCCATACCCAGTTGGGTCTTTGCTCTCTCAGTTGGCTCCGTCAACAACATCTTCCGACCTTCGGCCAGAACTGATGTCAGGGTCCAAAAAGGAATCATCCTTTTCAGCAAGAATACCTTCATCTGGAAATAGTTCTGCTACTTCTGTGGGTTTAATCTTCTCACAAGGCGGGTCTGTCTCGCTATCTGATGTGCAACTCTCAAGCCCGAGTTCCGCCCCTCTAAGCAGTAGCAGAAGCACCAGACAAAGCAGCGAGATACGTTGA | 909 | 0.5347 | MDLYGRGPARNGSNPVNQPEWRSPGATDTALEESMWHLTLGGGGGGGEYYPERHGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAVAAAVRVTGDYPERVGEPPCQYGGASSSLRVARPPMLHGSYVQGAYAPVLLSPGVVQFPGWSHYSAPVSPVPSPGAQPGVGATSLYGGLQPCAFYLQNGHCKFGSTCKFDHPLGSMRYSPSASSLIDVPVTPYPVGSLLSQLAPSTTSSDLRPELMSGSKKESSFSARIPSSGNSSATSVGLIFSQGGSVSLSDVQLSSPSSAPLSSSRSTRQSSEIR | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed8g0744 | 302 | PANTHER | PROTEIN PHOSPHATASE RELATED | 114 | 171 | - | - | |
Aed8g0744 | 302 | ProSiteProfiles | Zinc finger C3H1-type profile. | 53 | 81 | IPR000571 | GO:0046872 | |
Aed8g0744 | 302 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 | 114 | 171 | - | - | |
Aed8g0744 | 302 | Gene3D | - | 50 | 127 | - | - | |
Aed8g0744 | 302 | Gene3D | - | 171 | 221 | - | - | |
Aed8g0744 | 302 | SUPERFAMILY | CCCH zinc finger | 55 | 82 | IPR036855 | GO:0046872 | |
Aed8g0744 | 302 | SUPERFAMILY | CCCH zinc finger | 173 | 201 | IPR036855 | GO:0046872 | |
Aed8g0744 | 302 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 174 | 196 | IPR000571 | GO:0046872 | |
Aed8g0744 | 302 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 56 | 80 | IPR000571 | GO:0046872 | |
Aed8g0744 | 302 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 | 18 | 107 | - | - | |
Aed8g0744 | 302 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Aed8g0744 | 302 | PANTHER | PROTEIN PHOSPHATASE RELATED | 18 | 107 | - | - | |
Aed8g0744 | 302 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 | 172 | 280 | - | - | |
Aed8g0744 | 302 | PANTHER | PROTEIN PHOSPHATASE RELATED | 172 | 280 | - | - | |
Aed8g0744 | 302 | MobiDBLite | consensus disorder prediction | 276 | 302 | - | - | |
Aed8g0744 | 302 | SMART | c3hfinal6 | 53 | 80 | IPR000571 | GO:0046872 | |
Aed8g0744 | 302 | SMART | c3hfinal6 | 171 | 197 | IPR000571 | GO:0046872 | |
Aed8g0744 | 302 | MobiDBLite | consensus disorder prediction | 227 | 262 | - | - | |
Aed8g0744 | 302 | ProSiteProfiles | Zinc finger C3H1-type profile. | 170 | 198 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed8g0744 | Aed-Chr8 | 6361224 | 6366006 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed8g0744 | 1 | 249 | C2H2 Transcription Factor Family | AT5G18550 | 36.220 | 1.42e-33 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Aed8g0744 | zf-CCCH | 2.4e-08 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed8g0744 | - | - | gmx:100805017 | 221.476 |