Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0740 ATGGGTGACAAAGTCTTAGACGACAGAGAAAGCTTTAAGTATCATGACTTGACAGCTTCAACTACTGCCACTGAACAAGATCAAGATGGGGTGGTGATGTTGAAGGAGCAAGATCGGTTGCTTCCAATAGCGAACGTGGGGCGCATAATGAAGCAGATCCTTCCTCCAAACGCGAAGATCTCAAAGGAAGCTAAAGAAACCATGCAAGAGTGTGTATCCGAGTTCATTAGCTTTGTCACTGGAGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAGACCGTTAATGGTGACGATATTTGCTGGGCCCTCGCTACTCTAGGGTTTGATGACTACTCTGAGCCCCTTAAGAGGTACTTGCATAAGTTTAGGGAGTTTGAGGGTGAGAGAGCTAATCAAAATAAGGGTAACAACAACACTTATGAAAACTAA 432 0.4468 MGDKVLDDRESFKYHDLTASTTATEQDQDGVVMLKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYSEPLKRYLHKFREFEGERANQNKGNNNTYEN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0740 143 ProSitePatterns NF-YB/HAP3 subunit signature. 71 87 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aed8g0740 143 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Aed8g0740 143 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Aed8g0740 143 PRINTS CCAAT-binding transcription factor subunit A signature 106 124 - -
Aed8g0740 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 40 104 IPR003958 -
Aed8g0740 143 Gene3D Histone, subunit A 33 143 IPR009072 GO:0046982
Aed8g0740 143 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 18 139 - -
Aed8g0740 143 SUPERFAMILY Histone-fold 37 139 IPR009072 GO:0046982
Aed8g0740 143 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 18 139 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0740 Aed-Chr8 6336492 6336923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0740 12 134 CCAAT-HAP3 Transcription Factor Family AT2G47810 65.185 1.89e-63 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aed8g0740 CBFD_NFYB_HMF 7.7e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0740 K08065 - gmx:100817274 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0740 8 6336492 6336923 Aed8g0740 8 6336492 6336923 ECH