Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0732 ATGGTCGAAACCAGACGCGGCGCCTCTTCTTCCAAGCGCTCTCTCTCCGCGCCTTCTGCACCCAACACCAAACGATCCAAGGTGTCTGAGGATTCCTCTGTGCCTCCGGTCAACGAATCTGGAACCGGAAATGAATCTGGGGAACCGGAGCTACGGCCCTCTGATCTGCCAGATACGACGTCGTTGAAGGCTGTGGATGTTTGTGACGGGGTGTTACCGGATAAGTCTCCCTCTGAAGGCGAGGCTTTGGTGCTTGCACAGTGTGGAGGTGAAACTGCGGAGAAAGCGAAGGTGGCTGGTCTGCCCCCAAGAAACATGAAGAAACGTTCTTTGAAAACGTGCCCCAAGACTGCGTGGGGAAAGCTCCTCTCTCAGTGTTCTCAGAATCCTCACGTGTGCATGAGTGAACCTATTTTCACCGTTGGTCAAGGTCGAAATTGTAATTTATATCTTAAGGATCCCACCATTGGTAGTGTTTTGTGCAAGTTGAGCCACATAGAGTTTACTGACCACAGTTATCATTTGAACTCTGCACAGCGTGGAGGTTCATCAGGTGCATTACTGGAAATCACAGGGGCCAAAGGTTTTATTCACGTTAATGGGAAGACTTATAGAAAGAGTGCCCATCTAATTTTAAGTGGAGGTGATGAGGTTGTCTTTGGTTGTTCTGCCAAGTATGCTTATATCTTTCAGCAGCTGATGAATAGTAATATTAGTACTGCTGATATTCCTTCTTCTGTGAGTATTTTGGAAGCCCAGAGTGCTCCAATAAGTGGAATGCAAGTTGAAGCCAGATCTGGAGACCCTTCTGCTGTTGCTGGAGCATCTATATTGGCATCTTTATCTAATAATATTTGTAAAGAATTATCTCTCCTAACACCTGCTGCTAAAACTGGGAAGAATGTGCAGCAGAACACTGACATTTCATCACTACATTCTGGCCGTGGGGATGATATCACAGACAATGAAATGAATGATACCACCAATAATGATGAACCAGCTGGAGATTTTTCTGCTGAGAAAACTGTTCTTGCATCCTCTAGCACTGTTAACGAAAATCCTAGCCTTGACTCAGCAGAAGTCGATACCAATATTGATGCAGATGTTGGGAAGATGACTGCTGCAACATATGAGTTGAGGCCATTACTGCACATGCTTACTGGATCATGTCCTGAATTTGATAGCATTTCCAAGTTATTGGAAGGGCGAAGGGAATTGAGAGCACTTCTTAAAGATGTTGAAACCCCAACAGTATTGGCATCAACCAAGCGGCAGGCATTTAAGGACAGTTTACAACAGAGAATTCTCAAAGCTGAGAATATTGATATCTCATTTGAAACTTTCCCATATTATCTAAGTGATACAACAAAGAACGTTTTGATTGCTTCTACATTTATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGACCTCCCATCGGTGTCACCACGAATTTTGTTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAGACTTTGTCCAAGGCACTTGTGAAGCATTTTGGTGCCAGGCTACTAATCGTGGATTCTCTTTCACTGCCTGGTGGACCACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCTGGGGCTGAAAAACCATCTGTGTTTTCTAGGAAGAGAAGTTTCCAGACTGTCATGTTACAGCAAAAGAAACCAGCTTCTAGTCTCACTGCTGAAATTGTTGGTGGACAGTGTAAAAGTATCAATGGACACACTCTAATTTCTAGTGCATCAACAAAAGGCACTACTCTTAAAAAGGGAGATCGAGTAAAATTTACTGGTAACTTTCCTTCTACCGTCTCATCGTTTCCAAATTATATTTCAAGGGGACCAAGCTATGGCTCCCGGGGTAAAGTTCTCCTAGCTTTTGAAGATAACAGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGTGGCCTTTGCGAAGATGATCATGGGTTCTTCTGTTCTGCAAATCATTTACTACGAGTAGACGGCTCTGGAGGAGATGATCTTGACAAAGTTGCAATTAATGAAATCTTTGAGGTTGCCTCAAATCAGAGTAAAAGTGGTGCATTCGTGTTGTTCATTAAAGATATAGAGAAGGCAATGATTGGCAACTATGAAGTTTTAAAAAGTAAATTTGAAAGCTTGCCACCAAATGTCGTGGTAATTGGTTCTCACACACAGTTGGATAATCGTAAGGAGAAGACTCAAGCTGGCGGTCTTCTGTTTACCAAGTTTGGAAGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTAGTAGACTGCATGATAGAAGCAAAGAAACTTCTAAAGTTATGAAGCAACTTAATCGCCTTTTTCCAAACAAAGTGACCATACAGTTGCCTCAGGATGAGGCTTTACTCTCTGACTGGAAGCAGCAGTTAGATCGTGACATTGAAATTATGAAAGCTCAGTCCAATGTTGTCAGCATTCGTGTGGTGAGACTTTCAGTTTTTGTGCTTGTCTTGGATGAGATTAGTTATTGTGTGCCTTTGGAGCATGTGACATCACATGCATTTGCTTTGTGGAAATTTCCCCACTGGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTACTTACTGATGTTATTCCACCGACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTTAAGGAAACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTGGCAAAGGACAGCTGGCCAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTTATTAACATTTCAATGTCCAGCATTACGTCCAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTCATGGTTAATTGGGATGGTTTGCGAACAAAAGATAAAGAGCGTATACTTGTTCTTGCTGCTACAAACAGACCTTTTGATCTTGACGAGGCTGTTATAAGGAGGCTTCCACGAAGATTGATGGTTAATTTGCCTGATGCTCCAAATAGAGAAAAAATTGTCAGAGTTATTTTAGCAAAAGAAGAGTTGGCACCTGATGTTGATTTTGAAGCAATAGCAAATATGACTGATGGATATTCAGGGAGTGACCTAAAGAATCTATGTGTCACAGCAGCTCACTGTCCAATAAGAGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAACCTAGCATTGGATGAGAACCAGCCTTTACCTCAGTTGTGTAGCAGTTCCGACATTCGATCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGGTTTGTGCTAGTGTGTCATCGGAGTCAAGAAATATGAATGAACTACTCCAATGGAACGACCTTTACGGAGAAGGCGGATCGAGAAAAATGAGATCTTTGAGCTATTTCATGTAA 3603 0.4208 MVETRRGASSSKRSLSAPSAPNTKRSKVSEDSSVPPVNESGTGNESGEPELRPSDLPDTTSLKAVDVCDGVLPDKSPSEGEALVLAQCGGETAEKAKVAGLPPRNMKKRSLKTCPKTAWGKLLSQCSQNPHVCMSEPIFTVGQGRNCNLYLKDPTIGSVLCKLSHIEFTDHSYHLNSAQRGGSSGALLEITGAKGFIHVNGKTYRKSAHLILSGGDEVVFGCSAKYAYIFQQLMNSNISTADIPSSVSILEAQSAPISGMQVEARSGDPSAVAGASILASLSNNICKELSLLTPAAKTGKNVQQNTDISSLHSGRGDDITDNEMNDTTNNDEPAGDFSAEKTVLASSSTVNENPSLDSAEVDTNIDADVGKMTAATYELRPLLHMLTGSCPEFDSISKLLEGRRELRALLKDVETPTVLASTKRQAFKDSLQQRILKAENIDISFETFPYYLSDTTKNVLIASTFIHLKCNGFGKYASDLPSVSPRILLSGPAGSEIYQETLSKALVKHFGARLLIVDSLSLPGGPPSKEVDSAKESSGAEKPSVFSRKRSFQTVMLQQKKPASSLTAEIVGGQCKSINGHTLISSASTKGTTLKKGDRVKFTGNFPSTVSSFPNYISRGPSYGSRGKVLLAFEDNRSSKIGVRFDKSIPDGNDLGGLCEDDHGFFCSANHLLRVDGSGGDDLDKVAINEIFEVASNQSKSGAFVLFIKDIEKAMIGNYEVLKSKFESLPPNVVVIGSHTQLDNRKEKTQAGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETSKVMKQLNRLFPNKVTIQLPQDEALLSDWKQQLDRDIEIMKAQSNVVSIRVVRLSVFVLVLDEISYCVPLEHVTSHAFALWKFPHWDVVTENEFEKKLLTDVIPPTDIGVTFDDIGALENVKETLKELVMLPLQRPELFGKGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIVRVILAKEELAPDVDFEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERNLALDENQPLPQLCSSSDIRSLKMEDFRYAHEQVCASVSSESRNMNELLQWNDLYGEGGSRKMRSLSYFM 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0732 1200 Pfam AAA+ lid domain 1089 1125 IPR041569 -
Aed8g0732 1200 MobiDBLite consensus disorder prediction 1 47 - -
Aed8g0732 1200 Pfam ATPase family associated with various cellular activities (AAA) 936 1065 IPR003959 GO:0005524|GO:0016887
Aed8g0732 1200 MobiDBLite consensus disorder prediction 526 545 - -
Aed8g0732 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1173 IPR027417 -
Aed8g0732 1200 MobiDBLite consensus disorder prediction 1 60 - -
Aed8g0732 1200 Gene3D - 894 1173 IPR027417 -
Aed8g0732 1200 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 837 - -
Aed8g0732 1200 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 872 1200 - -
Aed8g0732 1200 Gene3D - 118 240 - -
Aed8g0732 1200 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 837 - -
Aed8g0732 1200 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 872 1200 - -
Aed8g0732 1200 SUPERFAMILY SMAD/FHA domain 119 225 IPR008984 GO:0005515
Aed8g0732 1200 Gene3D - 1068 1162 - -
Aed8g0732 1200 SMART AAA_5 932 1069 IPR003593 -
Aed8g0732 1200 CDD AAA 934 1067 - -
Aed8g0732 1200 MobiDBLite consensus disorder prediction 302 334 - -
Aed8g0732 1200 ProSitePatterns AAA-protein family signature. 1039 1058 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0732 Aed-Chr8 6283711 6298056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0732 931 1136 Calmodulin-binding Proteins AT3G56690 36.190 3.86e-32 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0732 - - gmx:100800938 1958.34