Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0731 ATGGTCGAAACCAGACGCAGCAGCTCCTCCTCTTCCAAACGCTCTCTCTCTTCCCCCACTCCCCCCACCAACACCAAACGATCCAAGGTGTCCGAGGATTCCTCATCCACCACCGTGCCTTCTGTTGCTCCGGTCAACGAATCTGGAACCGCAAATGAATCCGCCGAGCCGGAGCTGAGGCCCTCTGATCTGCCCGATACGGCGTCGTTGAAGGCAGTTGATGGCTGTGATGCGATTTCGCCCGATGAGTCTCCCTCTCCGCCCCTTGAAGGAGAGGCCTTGGTGTCCCCTCAGTGTCAAGGTGAAACAGCGGAGAAATCGAAGGGGGCGCCGATACCGGTGGCCACGGCGGGTGGTCGGGCGAAGAAACGCCCTTCGAAATTGAGCCCCAAGGCTTCCTGGGGAAAGCTTCTTTCTCAGTGTTCTCAGAATCCTCACTTGCCCTTGAGTGATGTTATCTTCACTGTTGGTCAAGGGCGTAATTGTAATTTATGGCTTAAAGATCCCGCTGTTGGTAATGTATTGTGCAAGTTGAGCCACAGAGAGCGTGGAGGCACGTCTGTTGCATTACTTGAAATCACAGGGAGCAAAGGTTCTGTTCAAGTTAATGGCAAGACATATCGAAAGAGTGCCCGTTTGATTTTAAGTGGAGGTGATGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATCTTTCAGCAACTCACAAATAATAATACTAGTCCTTCTGGTGTACCTAATTCTGTGAGTATTTTAGAAGCCCAGAGTGCTCCAATAAATGGAACTCAAGTTGAAGCTAGATCTGGTGATCCTTCTGCTGTTGCGGGAGCATCGATATTGGCCTCTTTATCTAATCTTCCTAAAGATTTATCTCTCCTTTCACCTCCTTCTAAAACTGGAAAGAATGTGCAACAGAACACTGACATTTCATCACTACCTTCTGGCAATGGGGATGATATGCTAGACAGTGAGATGAAGGATACCACCAATAATGATGTACCATCTGGAGTTTTCTCTGCTGACAAAACTGTTCTTTCATCCTCTAACACTATTAATGAAAATCCTAGCCTTGACACAGTGGAAGTTGACACCAATGTGGATGCCGATGTTGGGAAGGTGACTGCTGCTACATATGAATTGAGGCAATTACTGCGCATGCTTGCTGGGTCATGTCCTGAACTTGATTTAAGTTGTGGCATTTCCAAGATATTGGAGGAGCGAAGGGAATTAAAAGAGCTCCTTAAAGATGTTGATACCCCAACAATATTGGCATCAACCAGGCGACAAGCATTTAAGGACAGTTTACAGCAGAGAATTCTCAAATCTGAGAATATTGATGTCTCTTTTGAAACTTTCCCATATTATCTAAGTGATACAACAAAGAACGTTTTGATTGCTTCAACATTTATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGACCTCTCATCAGTATCTCCACGAATATTATTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAGACTTTGTGCAAGGCACTTTCAAAGCATTTTGGTGCCAGGCTACTGATTGTCGATTCTCTCTCATTGCCTGGTGGAGCACCATCAAAGGAAGTTGATTCCGCCAAAGAAAGTTCCAGACCTGAAAGACCATCATCTGTATTTGCTAAGAGAAGTTCCCAGACTGCCACATTACAACATAAGAAACCAGCTTCTAGTGTTGATGCTGAAATTGTAGGTGGATCCACGTTAAGTTCTCAGGCTATGCTGAAGCAAGAGGTTTCTACTGCAACGTCAAAAGGCACTACTCTTAAAGAGGGGGATCGAGTAAAATTTGTTGGTAATTCAACTTCTCCCGTCTCTTCACTACCAAATTATCCTTCAAGGGGACCAAGCTATGGCTCCCGGGGTAAAGTTCTGCTTGCTTTTGAAGATAATAGGTCTTCTAAAATTGGGGTTAGGTTTGATAAATCTATTCTAGATGGGAATGATCTTGGAGGCCTTTGTGAAGATGACCACGGGTTCTTTTGTTCTGCAAATCATTTACTACGGGTAGATGGTTCTGGAGGGGATGATGCGGATAAAGTTGCAATTAATGATATCTTTGAGGTTACCTCTAATCAGAGTAAAAGTGGTCCACTAGTGTTGTTTATTAAAGATATAGAGAAGGCAATGGTTGGGAACTATGAAGTTTTGAAAAATAAATTTGAAGGCTTGCCACCAAATGTTGTGGTAATTGGCTCTCATACTCTGCTTGACAATCGGAAGGAGAAGACCCAACCTGGTGGCCTTCTATTTACCAAGTTTGGGAGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTGGTAGACTGCATGACCGGAACAAAGAAACCCCTAAAGTAATGAAGCAACTTGGTCGCCTTTTCCCAAACAAAGTGACAATACAGCTGCCTCAGGACGAGGCTTTACTTTCTGATTGGAAGCAACTATTAGACCGTGATATTGAAACTATGAAAGCTCAGTCCAATATTGTTAGCATTCGCACAGTTCTCAACAGGATTGGATTGGATTGCCCTGACCTTGAGGCTCTTTGCATCAAAGACCAAACCTTAACAACTGAAAGTGTGGAGAAGATCATTGGCTGGGCTATAAGTTACCATTTTATGCATTCATCTGAAGCTTCTGTCAAAGATTCAAAGCTTGTAATATCTGCAGAAAGCATTAATTATGGGATTAACATTCTACAGGGCATTCAAAATGAGAACAAAAGCTTGAAAAAATCATTGAAGGATGTGGTTACTGAGAATGAGTTTGAGAAAAAACTGCTTGCAGATGTTATTCCGCCAACTGATATTGGGGTCACATTTGATGACATTGGAGCTTTAGAAAATGTGAAGGATACCTTGCAGGAATTGGTTATGCTTCCTCTTCAGAGACCTGAATTATTTTGCAAAGGACAGCTGACTAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTCATTAACATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAGGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGCTAGGGAGACGTGAAAGCCCTAGTGAGCATGAGGCTATGCGAAAAATGAAAAATGAGTTTATGGTAAATTGGGATGGTCTGCGTACAAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACAAACAGACCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGACGATTGATGGTTAATTTGCCAGATGCTCCAAACAGAGATAAAATTCTTAAAGTCATTTTAGCGAAAGAAGATTTGGCACCTGATGTTGATTTTGAAGCACTGGCTAGTATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTGTGTGTCACAGCAGCTCATTGTCCAATACGAGAGATCTTGGAGACAGAAAAGAAGGAGAGAAGCTTAGCATTGTCTGAGAACAAACCTTTACCTGGATTGTGTAGCAGCTCCGACATTCGTCCTTTAAAGATGGATGATTTTAGATATGCACATGAGCAGGTGTGTGCAAGCGTGTCATCGGAGTCAAACAATATGAATGAGCTACTACAATGGAATGACCTCTATGGAGAAGGAGGATCAAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3762 0.4298 MVETRRSSSSSSKRSLSSPTPPTNTKRSKVSEDSSSTTVPSVAPVNESGTANESAEPELRPSDLPDTASLKAVDGCDAISPDESPSPPLEGEALVSPQCQGETAEKSKGAPIPVATAGGRAKKRPSKLSPKASWGKLLSQCSQNPHLPLSDVIFTVGQGRNCNLWLKDPAVGNVLCKLSHRERGGTSVALLEITGSKGSVQVNGKTYRKSARLILSGGDEVVFGSSGKHAYIFQQLTNNNTSPSGVPNSVSILEAQSAPINGTQVEARSGDPSAVAGASILASLSNLPKDLSLLSPPSKTGKNVQQNTDISSLPSGNGDDMLDSEMKDTTNNDVPSGVFSADKTVLSSSNTINENPSLDTVEVDTNVDADVGKVTAATYELRQLLRMLAGSCPELDLSCGISKILEERRELKELLKDVDTPTILASTRRQAFKDSLQQRILKSENIDVSFETFPYYLSDTTKNVLIASTFIHLKCNGFGKYASDLSSVSPRILLSGPAGSEIYQETLCKALSKHFGARLLIVDSLSLPGGAPSKEVDSAKESSRPERPSSVFAKRSSQTATLQHKKPASSVDAEIVGGSTLSSQAMLKQEVSTATSKGTTLKEGDRVKFVGNSTSPVSSLPNYPSRGPSYGSRGKVLLAFEDNRSSKIGVRFDKSILDGNDLGGLCEDDHGFFCSANHLLRVDGSGGDDADKVAINDIFEVTSNQSKSGPLVLFIKDIEKAMVGNYEVLKNKFEGLPPNVVVIGSHTLLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFGRLHDRNKETPKVMKQLGRLFPNKVTIQLPQDEALLSDWKQLLDRDIETMKAQSNIVSIRTVLNRIGLDCPDLEALCIKDQTLTTESVEKIIGWAISYHFMHSSEASVKDSKLVISAESINYGINILQGIQNENKSLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLQELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRESPSEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRDKILKVILAKEDLAPDVDFEALASMTDGYSGSDLKNLCVTAAHCPIREILETEKKERSLALSENKPLPGLCSSSDIRPLKMDDFRYAHEQVCASVSSESNNMNELLQWNDLYGEGGSRKMRSLSYFM 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0731 1253 MobiDBLite consensus disorder prediction 1 131 - -
Aed8g0731 1253 Pfam AAA+ lid domain 1142 1178 IPR041569 -
Aed8g0731 1253 MobiDBLite consensus disorder prediction 549 566 - -
Aed8g0731 1253 ProSitePatterns AAA-protein family signature. 1092 1111 IPR003960 GO:0005524|GO:0016887
Aed8g0731 1253 Gene3D - 947 1226 IPR027417 -
Aed8g0731 1253 CDD FHA 159 234 IPR000253 GO:0005515
Aed8g0731 1253 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1253 - -
Aed8g0731 1253 SUPERFAMILY SMAD/FHA domain 134 230 IPR008984 GO:0005515
Aed8g0731 1253 MobiDBLite consensus disorder prediction 1 55 - -
Aed8g0731 1253 CDD AAA 987 1120 - -
Aed8g0731 1253 MobiDBLite consensus disorder prediction 292 324 - -
Aed8g0731 1253 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1253 - -
Aed8g0731 1253 Gene3D - 133 243 - -
Aed8g0731 1253 MobiDBLite consensus disorder prediction 611 626 - -
Aed8g0731 1253 MobiDBLite consensus disorder prediction 531 571 - -
Aed8g0731 1253 Gene3D - 1121 1215 - -
Aed8g0731 1253 Pfam ATPase family associated with various cellular activities (AAA) 989 1118 IPR003959 GO:0005524|GO:0016887
Aed8g0731 1253 MobiDBLite consensus disorder prediction 593 626 - -
Aed8g0731 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1225 IPR027417 -
Aed8g0731 1253 SMART AAA_5 985 1122 IPR003593 -
Aed8g0731 1253 Coils Coil 909 929 - -
Aed8g0731 1253 MobiDBLite consensus disorder prediction 292 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0731 Aed-Chr8 6268784 6280498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0731 984 1189 Calmodulin-binding Proteins AT3G56690 36.667 7.05e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0731 - - gmx:100801477 2250.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0731 8 6268784 6280498 Aed8g0731 8 6268784 6280498 ECH