Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0728 ATGGTGGCGTCTGCAGCTTCAACATGGATCACGTCCCTCTCGTGTTCACCAAATGCAACTCCAAATTTACCTCACTGGCTGAGATTCATTTTCCTCTCGCCGTGTCCTCAGAGGGCTCTTTTGTCTGGCGTTGACATTCTACTCCTGTTGACCCTCTTTGTGTTTGCACTCATAAAGCTCTATTCCAGGTTCACTTCCAATGGAAGCAACCACAGCAACAACAACTCAGAGCTCGACAAGCCTCTTATCAGAAACAACAGAGTTGTTTCTAACCGAACAACAATATGGTTTAAGCTGACTCTAACTGCAACCGCTGTTTCGACAATATTGTACACTGTTGCTTGCATTCTGGTGTTTACAAGCTCCACCAAGGGGACGTGGAAGCAAATTGATGGCTTCTTTTGGTTACTTCAAGCCATAACACAACTAGTCCTTGGAGTATTAATCATCCATGAGAAAAGATTTGAAGCTGTTGTTCACCCTTTGTCGCTTAGGATATACTGGATTGCGAATTTCGTTTTGGTTTCTTTGTTCACAGCTTCTGGGGTCATACGTTTGGTCTCTGTGGGAGTGGAAGATGGGAAAAACTTCAACTTCATGGTTGATGACACGGTTTCTTTCATTTCTCTACCATTGTCACTTTTTCTGCTTTGTGTTGCAGTTAAAGGCTCCACCGGGGTTGTGTCAAGGGAAGAAACGCAACCGCTTATTGATGATGAGGAAACAAAGCTATACGAGAAATCCAATGTTACTGGCTTTGCTTCAGCTTCTGCAGTATCCAAGGCCTTTTGGATTTGGATAAACCCGTTGCTGAGTAAAGGGTACAAGTCACCGTTGAAGATTGATGAAATTCCATACCTTTCACCTCTGCATAGAGCTGAGAGGATGTCAGTTATCTTTGAATCAAAATGGCCTAAATCAGATGAGAGGTCGAAGCACCCGGTTCGAACCACGTTGATTCGGTGTTTCTGGAGGGAGATAGCCTTCACTGCCTTCCTTGCTGTTATTAGGCTATCTGTGATGTTCGTAGGACCAGTTCTCATTCAAAGTTTTGTTGATTTCACAGCAGGGAAAGGTAGCTCTGTGTATGAAGGGTATTACCTCGTGTTGATTCTCCTGTGTGCCAAATTTGTAGAAGTTTTGACAACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGGATGCTTATCAGATGCACACTCATCACTTCTTTGTACAAGAAGGGGCTGAGGCTAACGGGTTCCGCGAGACAGGACCATGGAGTCGGGCCTATTGTCAATTACATGGCTGTTGATACTCAACAACTCTCCGATATGATGCTTCAGTTACACGCCGTGTGGATGATGCCATTTCAAGTTGGCATTGGTTTGTTTCTGCTGTACAATTGTCTAGGTGCTGCAGTGATTACTGCTTTGCTTGGACTTCTTGCTGTCATTGTATTTGCTGTGGTGGCTACTAGGAAGAACAAGCGTTACCAGTTCAATACCATGATGAGCCGTGATTCGAGGATGAAGTCAGTGAACGAGATGCTTAATTACATGCGTGTCATCAAGTTCCAAGCTTGGGAAGAGCATTTCAATGGGAGGATCTTGGGTTTCCGAAAGTCCGAGTTTGAATGGCTTTCCAAGTTCATGTACTCAATCTGTGGCGTTATTATTGTGCTGTGGAGCACGCCATTGCTGATATCAGCTCTCACGTTTGGTACCGCGCTTTTGCTCGGTGTTCGACTTGATGCAGGGACGGTTTTCACCACCACAACTGTGTTTAAGATCCTGCAGGAGCCTATTAGGACCTTCCCTCAGAGTATGATATCTCTCTCACAAGCGCTGGTATCTCTTGGGAGGTTGGATAGGTACATGTCTAGCAGGGAATTGTTGGATGATTCGGTTGAGAGAGAGGAAGGGTGTGGTGGACACACTGCTGTGGAGGTCAAGGATGGAACTTTCAGCTGGGATGATGATGGCCAACTTCGAGACTTGAAAAATATTAACTTGAAAATCAATAAGGGTGAGCTTACTGCAATTGTTGGGACCGTGGGATCGGGGAAGTCTTCACTCCTTGCTTCGATTCTTGGCGAGATGCGCAAAATTTCTGGGAAGATTCAAGTTTGTGGGAGTACTGCTTATGTTGCACAAACATCTTGGATTCAAAATGGGACCATTGAAGAGAACATTCTTTTTGGTGTGCCAATGAACAGACACAAGTACAACGAGGAATGCGTGAGGGGGGCTCTGAAAGGCAAGACCATTATTCTTGTAACACATCAAGTAGACTTTCTGCATAATGTGGATCTTATAGTGGTGATGAAGGATGGAACGATAGTCCAATCAGGGAAGTACGATGATCTACTTGCTTCTGGAATGGATTTCAGTGTTCTTGTTGCAGCACATGAGACATCTATGGAACTAGTGGAGCAAGGTGCAGCTGAACCTGTGGAAAATTTGAACAAACCAATGAAATCTCCAAAGGCAGCTTCTAATAGCAGAGAATCCAATGGTGAAAGCAATTCTCTTGAGCAGCCCGAGTCTGGCAAAGAAGGTTCTAAACTCATCAAAGAAGAGGAACGAGAAACCGGGAAAGTTAGCTTCCGTATCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTATAGGAGTGATCTTGCTTTCTGTGTTGTGGCAAGCATCAATGATGGCTAGTGATTATTGGCTGGCATATGAAACATCAGAAGAGCGTGCTCAGTTGTTCAATCCTTCTATGTTTATTTCCATCTACTCAGCTATTGCTGTAGTTTCAGTTTTTTTAATTGTGCTAAGATCCTACTCTGTTACTGTCTTGGGGTTAAAGACAGCACAGATTTTCTTCACTCAAATCCTCCACAGCATCTTGCATGCCCCCATGTCTTTCTTTGACACTACTCCATCCGGAAGAATTCTAAGCAGGGCATCCACTGATCAGACCAATGTTGATGTCTTTATCCCATTGTTCCTCAATTTTGTGGTGGCCATGTACATTACAGTGGTCAGCATCTTCATAGTCACATGTCAAAATTCTTGGCCAACGGCTTTCTTGTTAATTCCTCTAGCTTGGTTAAACATTTGGTACCGGGGTTATTTTCTTGCCTCATCTCGAGAGTTAACTCGTCTGGATTCAATAACAAAAGCACCTGTGATTCACCATTTCTCTGAAAGCATTTCCGGGGTCATGACAATCCGTGCATTCAGAAAGCAGAAGGAATTTTGCGGAGAAAACATTAACCGGGTGAATGCTAATTTGCGAATGGATTTCCACAACTTCAGTTCCAATGCTTGGTTGGGTTTCCGCTTGGAATTGCTTGGAAGCTTTGTTTTTTGCTGTTCTGCTATGTTCATGATCATGTTACCCAGCAGTATCATAAAGCCAGAAAACGTTGGTTTGTCGCTCTCATATGGCTTGTCATTAAATGCCGTGATGTTTTGGGCTATATACATGAGCTGTTTCATTGAAAACAAATTGGTATCTGTTGAGAGGATCAAACAATTCACAAATATTCCATCAGAAGCTGCATGGAACATTAAGGATCGTCTGCCTCCTGCTAATTGGCCTGATCAAGGCCATGTTGACATCAAAGACTTGCAGAGTTTGGATCGTTGCCAACTAAAAGATGCAGTGACTACTAAGCCTGAGAAACTTGACTCTTCAGTGGTTGATAATGGAGATAACTGGAGTGTGGGGCAGAGGCAGTTGCTTTGTTTAGGGAGGGTCATGCTTAAGCAAAGCAGGCTTTTGTTTATGGATGAGGCAACAGCTTCTGTTGATTCTCAAACCGATGCTGTAATTCAGAGGATCATCCGAGAGGACTTTGCAGCACGGCTGGCCAAAGAATTTGACTCACCGGCCAACTTGCTCCAAAGGCAATCTCTCTTTGGGGCGTTAGTTCAAGAGTATGCAAACCGTTCCAGTGGCCTGTAA 3939 0.4407 MVASAASTWITSLSCSPNATPNLPHWLRFIFLSPCPQRALLSGVDILLLLTLFVFALIKLYSRFTSNGSNHSNNNSELDKPLIRNNRVVSNRTTIWFKLTLTATAVSTILYTVACILVFTSSTKGTWKQIDGFFWLLQAITQLVLGVLIIHEKRFEAVVHPLSLRIYWIANFVLVSLFTASGVIRLVSVGVEDGKNFNFMVDDTVSFISLPLSLFLLCVAVKGSTGVVSREETQPLIDDEETKLYEKSNVTGFASASAVSKAFWIWINPLLSKGYKSPLKIDEIPYLSPLHRAERMSVIFESKWPKSDERSKHPVRTTLIRCFWREIAFTAFLAVIRLSVMFVGPVLIQSFVDFTAGKGSSVYEGYYLVLILLCAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLTGSARQDHGVGPIVNYMAVDTQQLSDMMLQLHAVWMMPFQVGIGLFLLYNCLGAAVITALLGLLAVIVFAVVATRKNKRYQFNTMMSRDSRMKSVNEMLNYMRVIKFQAWEEHFNGRILGFRKSEFEWLSKFMYSICGVIIVLWSTPLLISALTFGTALLLGVRLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELLDDSVEREEGCGGHTAVEVKDGTFSWDDDGQLRDLKNINLKINKGELTAIVGTVGSGKSSLLASILGEMRKISGKIQVCGSTAYVAQTSWIQNGTIEENILFGVPMNRHKYNEECVRGALKGKTIILVTHQVDFLHNVDLIVVMKDGTIVQSGKYDDLLASGMDFSVLVAAHETSMELVEQGAAEPVENLNKPMKSPKAASNSRESNGESNSLEQPESGKEGSKLIKEEERETGKVSFRIYKLYCTEAFGWWGIIGVILLSVLWQASMMASDYWLAYETSEERAQLFNPSMFISIYSAIAVVSVFLIVLRSYSVTVLGLKTAQIFFTQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFLNFVVAMYITVVSIFIVTCQNSWPTAFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKEFCGENINRVNANLRMDFHNFSSNAWLGFRLELLGSFVFCCSAMFMIMLPSSIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKLVSVERIKQFTNIPSEAAWNIKDRLPPANWPDQGHVDIKDLQSLDRCQLKDAVTTKPEKLDSSVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQRIIREDFAARLAKEFDSPANLLQRQSLFGALVQEYANRSSGL 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0728 1312 MobiDBLite consensus disorder prediction 811 851 - -
Aed8g0728 1312 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Aed8g0728 1312 Pfam ABC transporter transmembrane region 882 1124 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed8g0728 1312 Pfam ABC transporter transmembrane region 329 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed8g0728 1312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1202 1279 IPR027417 -
Aed8g0728 1312 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 738 1202 - -
Aed8g0728 1312 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 1202 1279 - -
Aed8g0728 1312 SUPERFAMILY ABC transporter transmembrane region 319 621 IPR036640 GO:0005524|GO:0016021
Aed8g0728 1312 SUPERFAMILY ABC transporter transmembrane region 876 1176 IPR036640 GO:0005524|GO:0016021
Aed8g0728 1312 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 880 1159 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed8g0728 1312 Gene3D - 737 817 IPR027417 -
Aed8g0728 1312 Gene3D - 624 736 IPR027417 -
Aed8g0728 1312 CDD ABC_6TM_ABCC_D2 879 1171 IPR044726 GO:0140359
Aed8g0728 1312 Gene3D ABC transporter type 1, transmembrane domain 843 1174 IPR036640 GO:0005524|GO:0016021
Aed8g0728 1312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 591 786 IPR027417 -
Aed8g0728 1312 Gene3D ABC transporter type 1, transmembrane domain 302 623 IPR036640 GO:0005524|GO:0016021
Aed8g0728 1312 MobiDBLite consensus disorder prediction 820 843 - -
Aed8g0728 1312 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 328 608 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed8g0728 1312 Pfam ABC transporter 660 707 IPR003439 GO:0005524
Aed8g0728 1312 Pfam ABC transporter 1218 1259 IPR003439 GO:0005524
Aed8g0728 1312 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 877 IPR003439 GO:0005524
Aed8g0728 1312 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1202 1279 - -
Aed8g0728 1312 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 738 - -
Aed8g0728 1312 Gene3D - 1175 1304 IPR027417 -
Aed8g0728 1312 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 89 738 - -
Aed8g0728 1312 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 738 1202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0728 Aed-Chr8 6238700 6248309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0728 1191 1273 Calmodulin-binding Proteins AT2G36910 28.916 1.52e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0728 - K05666 gmx:100793361 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0728 8 6238700 6248309 Aed8g0728 8 6238700 6248309 ECH