Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0718 ATGAGCGGAGCGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAGGATAAGATTATGGACATTGCTTCTCTGGAGAAGTTCCTTCAGGAGAGGATTAAGGTTGGCGGCAAGGCCGGTGCACTCGGCGAATCCATCACCGTCACCAGGGACAAGAACAAGATCACCGTCACCTCTGACAGCAACTTCTCCAAACGGTATCTGAAATATTTGACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGTGTGATTGCATCCAACAAGGACAGGAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAAGAAGACTGA 360 0.4861 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGESITVTRDKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0718 119 PANTHER 60S RIBOSOMAL PROTEIN L22 2 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aed8g0718 119 Gene3D - 1 119 IPR038526 -
Aed8g0718 119 PANTHER 60S RIBOSOMAL PROTEIN L22-2-LIKE 2 119 - -
Aed8g0718 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0718 Aed-Chr8 6173937 6175590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0718 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.069 2.65e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0718 K02891 - pop:7455994 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0718 8 6173937 6175590 Aed8g0718 8 6173937 6175590 ECH