Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0705 ATGGCCAACAGGTTACGTAGTAGTAGTAGTAGTAATTCCCTCCCAACAACATCAAACATTCTCATCCTCGTACCTTTGTTGTTATTAGCCTCTGTAGCTTTCGCTGACAATATCACTCCCAGCAACACTTCGGTTTCTCCCGGAACCATATGCAAGTCCACCCCAGACCCATCCTATTGCGATTCCGTGCTCCCTCCCGACCAAAACGGCAGCGTTTACGACTATGGCCGGTTTTCGGTCAGAAGGTCTCTATCACAAGCCACCAGTTTCTTGAACTTAGTTAACAAATACCTCCAACGCCGTTCCTCTCTTTCAACCCCCGCAATCCACGCGCTCGAAGATTGCCAAACCCTCGCCGAACTCAACGTTGATTTTCTCTCTAGTTCCTTGCAAACAGTGAAAAAAACAACCATGCTTTTACCCACTTCCCAAGCTGACGACATCCAAACACTCCTCAGTGCCATTCTAACTAACCAACAAACCTGTCTGGAAGGCCTTCAAGCCACCGACTCCACTTGGCGCGTGATCAAGAACGGACTCTCCGTCCCGCTCTCCAATGACACCAAGCTATACAGCGTCTCACTAGCACTCTTCACAAAGGGGTGGGTCCCCGCCACCAACGCCAAAGTCACCGTCACTGCAACTGCGAAACACCGCGGGTTTCGAAACGGGCGTTTGCCGCTCAAGATGTCCAGCAGAACGCGCGCGATCTACGAATCCGTGAGTCGGAGAAAGCTCCTTCAGGCGACACTGAGTAACGAGGTTAACGTGAAAGACATTGTGACGGTGAGCAAAGATGGAACCGGAAACTTCACCACCGTCAGCGACGCCGTGGACGCGGCGCCGAACAAGACTTCGTCGACGGAGGGATACTTCCTGATCTACGTCACCGCCGGCGTTTACGAGGAAAACGTGTCCATTGATAAGAAAAAGACGTACTTGATGATGGTTGGAGACGGGATGAACAAGACAATTATTACTGGGAATCGCAGTGTTGTTGATGGCTGGACCACCTTTAAGTCAGCCACATTTGCGGTGGTTGGGGAGGGATTCGTTGGTGTGAACATGACAATCCGCAACACTGCTGGGGCAGAGAAGCATCAAGCGGTGGCACTCCGCAACGGCGCAGATCTGTCCACGTTTTACAGCTGCAGCTTCGAGGGGTACCAAGACACGCTCTATACTCATTCCCTGAGACAATTCTACAGAGAATGCGACATCTACGGCACAGTGGATTTCATATTTGGAAACGCCGCGGTGGTGTTCCAAAACTGCAACATCTATCCTCGCCTTCCGATGAGTGGCCAATTCAACGCCATCACCGCACAGGGCCGAACCGACCCGAATCAAAACACGGGGACTTCCATCCACAACTGCACGATTCGACCGGCTGATGATTTGGCTGCGAACATCGACGCCGCTGAAACTTATCTTGGCAGGCCTTGGAAAAATTACTCCAGGACGGTTTTCATGCAGAGCTTTATGGACAGTGTTATCAATTCTGCTGGGTGGCGCCAATGGGACGGTGATTTTGCTTTGAGCACTCTTTACTATGCTGAGTTTAACAACACTGGACCTGGATCTAGCACTGCCAACAGAGTCACGTGGCCGGGTTACCATGTCATTAACGCCACCGATGCGGCTAATTTTACGGTGTCTAACTTCTTGCTTGGAGATAACTGGCTGCCCCAGACCGGAGTGTCTTACGCTACTAACTTGATATAA 1725 0.5113 MANRLRSSSSSNSLPTTSNILILVPLLLLASVAFADNITPSNTSVSPGTICKSTPDPSYCDSVLPPDQNGSVYDYGRFSVRRSLSQATSFLNLVNKYLQRRSSLSTPAIHALEDCQTLAELNVDFLSSSLQTVKKTTMLLPTSQADDIQTLLSAILTNQQTCLEGLQATDSTWRVIKNGLSVPLSNDTKLYSVSLALFTKGWVPATNAKVTVTATAKHRGFRNGRLPLKMSSRTRAIYESVSRRKLLQATLSNEVNVKDIVTVSKDGTGNFTTVSDAVDAAPNKTSSTEGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGMNKTIITGNRSVVDGWTTFKSATFAVVGEGFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRPADDLAANIDAAETYLGRPWKNYSRTVFMQSFMDSVINSAGWRQWDGDFALSTLYYAEFNNTGPGSSTANRVTWPGYHVINATDAANFTVSNFLLGDNWLPQTGVSYATNLI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0705 574 PANTHER PECTINESTERASE 38 572 - -
Aed8g0705 574 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 38 572 - -
Aed8g0705 574 Pfam Pectinesterase 261 559 IPR000070 GO:0030599|GO:0042545
Aed8g0705 574 Gene3D - 254 573 IPR012334 -
Aed8g0705 574 SUPERFAMILY Pectin lyase-like 258 570 IPR011050 -
Aed8g0705 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 200 IPR035513 -
Aed8g0705 574 Pfam Plant invertase/pectin methylesterase inhibitor 49 197 IPR006501 GO:0004857
Aed8g0705 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 200 IPR035513 -
Aed8g0705 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 19 198 IPR006501 GO:0004857
Aed8g0705 574 SMART PMEI_2 42 197 IPR006501 GO:0004857
Aed8g0705 574 CDD PMEI-like_3 49 202 - -
Aed8g0705 574 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0705 Aed-Chr8 6079546 6081359 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0705 21 574 Carbohydrate Esterase AT4G02330 63.636 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0705 K01051 - gmx:100790729 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0705 8 6079546 6081359 Aed8g0705 8 6079546 6081359 ECH
Aed2g2242 2 26029613 26031990 Aed8g0705 8 6079546 6081359 PCT