Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0704 ATGGCTCTCAAGTATATCTTTGTCCTTATATTGTCCATTTCCTATATGCTTTCCTTCTCTGTGTTGGCCTCATCCTCCATTGTTCCACACGATTCCATTTGTGGGTCCACCCAAGACCCTACTTATTGCAAAACCGTGCTTGCTAATATTCAAAACGGCAACGTCTTCGACTATGGTCGCATTTCATTTCGAAAGTCCTTGTCCCAAGCCCGTAAGTTCTTGAACTTAGTGGACTCGTATCTTCAGAGTAGATCATCGTCTTTGTCTCAATACACAGTTGGCGCTCTTCGAGATTGTCGATTCCTTGCTCAACAAAGTCTAGAATACTTATCAAACATCCATGACGCCACTGCTAACCAAGCTAGTGATGCTGTTCTTCCCACTTCTCAAGCTGAAGATTATGAAACCTATCTCAGTGCTGTTTTGACTAACCAACATACATGTTTAGAAGGCCTAAAGAGTGCATCTTCAGATGCAAGAGTGAAGAACGATATCATGTGGTCATCGCTCTCTAATGACTCCAAGCTTCACAGTGTCACATTGGCTTTGTTCCTAAAGGGTTGGGCGCCTGAGAAGAAAATCAAGACATCATGGCCACAAAATGGGAGACATTTGAATTTCAAAAATGGTCACTTACCTTTGATCATGTCAGACCGAGTACGTGCTATTTATAATTCTGCTAGACATCATGGGAGAAAAGTGCTAAAAACAGACAAAAATAACGGAAGTGTTGTGGTAAGTGACATTGTAGTTGTTAGTCAGGATGGAAGCGGACATTTCACTACTATCAACGATGCAATTGCTGCTGCACCAAATAACACAGTTGTTGATGATGGCTACTTCCTTATTTTGATCACTGAGGGAGTGTATCAAGAATACGTATCAATTGCCAAAAACAAGAAGTATTTGATGGTAGTTGGAGATGGAATCAATCGGACAATCATCACAGGCAATCATAGTGTTGGTGGAGATAATTTTACAACATTCAATTCAGCAACATTTGCTGTGGTTGCTGAAGGGTTTGTAGCAGTAAACATAACTTTCCGTAACACTGCTGGACCAAGCAAGGGCCAAGCAGTTGCACTAAGAAGTGGAGCGGATATGTCCACCTTCTACAGCTGCAGCTTTGAAGGTTATCAAGATACATTGTATACCCATTCTATGAGGCAATTTTATCGAGAATGTGATATTTATGGCACCGTTGACTACATATTTGGTAATGCCGCTGTTGTTCTTCAAAATTGCAACATATATTCTCGCCTCCCCCTCAATGGACAATTCAACACGATCACGGCTCAGGGTCGAACTGATCCAAATCAAAACACAGGCACTTCCATACAAAATGCGATTATTAAAGCTGCTGATGATTTGTCTCCAAATGTTGGCACTGTGCAAACCTACCTTGGGAGACCATGGAAGAATTATTCAAGGACAATCATTATGCAGTCCTTCATGGATAGTTTGATCAATCCTGCTGGTTGGCATGAATGGAATGGTGATTTTGCGTTGAGTACCTTATATTATGCAGAATATGATAATTCAGGACCTGGTTCAAACACAACAAGACGAGTAACATGGCCAGGTTATCATGTTATCAATGCCACAGATGCAACCAATTTCACCGTGTCTAACTTCTTGAGCGGAGATAATTGGATTCCTCAAACCGGTGTCCCATACGTAAGTGGGTCGATATAG 1695 0.4147 MALKYIFVLILSISYMLSFSVLASSSIVPHDSICGSTQDPTYCKTVLANIQNGNVFDYGRISFRKSLSQARKFLNLVDSYLQSRSSSLSQYTVGALRDCRFLAQQSLEYLSNIHDATANQASDAVLPTSQAEDYETYLSAVLTNQHTCLEGLKSASSDARVKNDIMWSSLSNDSKLHSVTLALFLKGWAPEKKIKTSWPQNGRHLNFKNGHLPLIMSDRVRAIYNSARHHGRKVLKTDKNNGSVVVSDIVVVSQDGSGHFTTINDAIAAAPNNTVVDDGYFLILITEGVYQEYVSIAKNKKYLMVVGDGINRTIITGNHSVGGDNFTTFNSATFAVVAEGFVAVNITFRNTAGPSKGQAVALRSGADMSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDYIFGNAAVVLQNCNIYSRLPLNGQFNTITAQGRTDPNQNTGTSIQNAIIKAADDLSPNVGTVQTYLGRPWKNYSRTIIMQSFMDSLINPAGWHEWNGDFALSTLYYAEYDNSGPGSNTTRRVTWPGYHVINATDATNFTVSNFLSGDNWIPQTGVPYVSGSI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0704 564 CDD PMEI-like_3 32 189 - -
Aed8g0704 564 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Aed8g0704 564 Pfam Plant invertase/pectin methylesterase inhibitor 31 183 IPR006501 GO:0004857
Aed8g0704 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 186 IPR035513 -
Aed8g0704 564 SMART PMEI_2 25 183 IPR006501 GO:0004857
Aed8g0704 564 Gene3D - 247 564 IPR012334 -
Aed8g0704 564 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 562 - -
Aed8g0704 564 PANTHER PECTINESTERASE 14 562 - -
Aed8g0704 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 184 IPR035513 -
Aed8g0704 564 SUPERFAMILY Pectin lyase-like 245 561 IPR011050 -
Aed8g0704 564 Pfam Pectinesterase 250 549 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0704 Aed-Chr8 6072935 6074734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0704 1 562 Carbohydrate Esterase AT4G02330 56.846 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0704 K01051 - gmx:100786124 816.994