Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0703 ATGAACAACCTCAAACTTGCATCCATTCTCACCGTGATTTCTGCGCTACTACTCTTCTTGTTCTTGGGAACAACTCATTTCACTAACACCCCAACAACAGCAATAGATCAAAAACATCACCTCCATTATTTTGAAAAAATGCACATACAAGTAGCCAAATCCACGTGCGAAGGAACACTCTACCCAGAGCTATGTGTCTCCACGCTAGCCACATTCCCAGATCTTGCTACAAAATCTGTCCCACAAGTGATCTCCTCAGTGGTCAACCACACCATGTACGAGGTAACATCATCGTCCTACAACTGCAGCGGCCTAAAAAAGAACCTCAAAAATCTCAAACCGCTCGACCGGAGAGCCCTCGATGACTGTCTCAAACTCTTCGAAGATACCAACGTTGAGCTCAAAGCCACCATGGACGATCTCTCCAAGAGCACCATAGGCTCGAAGCGGCACCAAGACTTGCAGACTCTGCTGAGCGGAGCAATGACCAACCTCTACACGTGCCTCGACGGCTTTGCTTACAGCAATGGGCACGTGAGGGGCAGAATCGAGAAGAAGTTGCTTCAAATATCGCATCACGTGAGCAACACGTTGGCCATGCTGAACAAAGTGCATGGATCAGTGAAGAAGAAAAAAACAACATCGTTTGAATCTGATGAAGAGGTGTTCCCCGAATATGGGAACATGAAAAATGGGTTCCCCGAATGGCTCTCCTCCAAAGACCGAAAGCTTCTCCAAGCTGCGGTGAATCAAACCAAGTTTGTGATACACATAAAAGCGGGGGCATACTTTGAGAATGTGGAAGTGATAAGGAAGAAAACCAATCTGATGTTTGTTGGAGACGGGATTGGAAAGACAGTGGTGAAAGGCAGTAGGAATGTTGTGGACGGGTGGACCACTTTTCAATCTGCAACTGTTGTTTCTGATGCGCTCTGCTGTACCCTTAAAATTCAGATATCACACAGTTCACACAGGCCAGTGTCAGTTACGACAACTTATGATAGATTCATGTCATGGCCACTGCTACCAGTGGCGACACCAATTTTTAGAAAGAAAATGACGTGA 1065 0.462 MNNLKLASILTVISALLLFLFLGTTHFTNTPTTAIDQKHHLHYFEKMHIQVAKSTCEGTLYPELCVSTLATFPDLATKSVPQVISSVVNHTMYEVTSSSYNCSGLKKNLKNLKPLDRRALDDCLKLFEDTNVELKATMDDLSKSTIGSKRHQDLQTLLSGAMTNLYTCLDGFAYSNGHVRGRIEKKLLQISHHVSNTLAMLNKVHGSVKKKKTTSFESDEEVFPEYGNMKNGFPEWLSSKDRKLLQAAVNQTKFVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKGSRNVVDGWTTFQSATVVSDALCCTLKIQISHSSHRPVSVTTTYDRFMSWPLLPVATPIFRKKMT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0703 354 PANTHER PECTINESTERASE 251 307 - -
Aed8g0703 354 Pfam Pectinesterase 249 308 IPR000070 GO:0030599|GO:0042545
Aed8g0703 354 CDD PMEI-like_3 54 206 - -
Aed8g0703 354 SMART PMEI_2 47 200 IPR006501 GO:0004857
Aed8g0703 354 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 204 IPR035513 -
Aed8g0703 354 PANTHER PECTINESTERASE 14 253 - -
Aed8g0703 354 PANTHER PECTINESTERASE 251 307 - -
Aed8g0703 354 PANTHER PECTINESTERASE 14 253 - -
Aed8g0703 354 SUPERFAMILY Pectin lyase-like 243 308 IPR011050 -
Aed8g0703 354 Pfam Plant invertase/pectin methylesterase inhibitor 53 200 IPR006501 GO:0004857
Aed8g0703 354 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 206 IPR035513 -
Aed8g0703 354 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 205 IPR006501 GO:0004857
Aed8g0703 354 Gene3D - 238 335 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0703 Aed-Chr8 6067769 6069762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0703 51 308 Carbohydrate Esterase AT1G53830 37.793 2.12e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0703 K01051 - gmx:100802881 471.855