Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0698 ATGTGTGGCGGTGCCATCATCGCTGATTTCATTCCCCGCCGTGGAGGCCGGCGCCTCACGGCCTCCGAGCTCTGGCCAAACTCATTTGGCAAAGACGACGACTTTGACTTCGATTACTCCCACATCGCTAATCAACAACCATCCACGCTCAATAACTCCCAACCTCCCAAACCCAAAGCTAGCGAGCAGGTTGAGAACAAGTCGCTGAAGAGGCAGAGGAAGAATCTCTACCGCGGGATTCGGCAGCGTCCGTGGGGCAAATGGGCGGCGGAGATTCGCGATCCCAGAAAAGGTGTGCGTGTCTGGCTGGGCACCTTCAACACTGCAGAAGAAGCCGCAAGAGCCTATGATCGCGAAGCGAGAAAAATCCGCGGCAAAAAGGCCAAGGTGAATTTCCCCAACGAGGACGACGATTATTCCATTCAGGCTCGTAATCCAATTCCACCCATTCCTTTCGCGCCACAAAACCTTCCCCTGTACCGTTGCGATCTCAACAATGCCCCCAGAAAACTCAACTTCGAGTTCGGTTACGACCTGAACCACGCGGGGGCATTTCCGTCCCACTCGGTGGTTGTCTCCGGCGATGAAAACTCGGTGTTAGCGTCGGGTTCAGAGGGTGCTTATTCGACAACTGAGTTTACGGGGAACGGATATTTGGTAATGGAGGAGATAGAGAAAGAGAAAGAGAAAAAGACAGAGACAGAGACAGAGGTTATTGAAGCTGCTCCAGAGGAAAAGAACAAAGTGCAAGAGCTTTCTGAGGAGCTGATGGCGTACGAGAATTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCCACGCCACCCAGTAATAATGCTCAGGAAAGCGTGGTTGGAGATCTCTGGAGTTTCGATTTCGATTAG 891 0.5163 MCGGAIIADFIPRRGGRRLTASELWPNSFGKDDDFDFDYSHIANQQPSTLNNSQPPKPKASEQVENKSLKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDDYSIQARNPIPPIPFAPQNLPLYRCDLNNAPRKLNFEFGYDLNHAGAFPSHSVVVSGDENSVLASGSEGAYSTTEFTGNGYLVMEEIEKEKEKKTETETEVIEAAPEEKNKVQELSEELMAYENYMKFYQIPYYDGQSTPPSNNAQESVVGDLWSFDFD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0698 296 Coils Coil 242 262 - -
Aed8g0698 296 PANTHER DNA-BINDING DOMAIN 1 271 IPR044808 GO:0003700|GO:0009873
Aed8g0698 296 Pfam AP2 domain 77 125 IPR001471 GO:0003700|GO:0006355
Aed8g0698 296 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Aed8g0698 296 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Aed8g0698 296 Gene3D AP2/ERF domain 76 134 IPR036955 GO:0003700|GO:0006355
Aed8g0698 296 PANTHER EREBP TRANSCRIPTION FACTOR 1 271 - -
Aed8g0698 296 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Aed8g0698 296 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Aed8g0698 296 MobiDBLite consensus disorder prediction 45 61 - -
Aed8g0698 296 MobiDBLite consensus disorder prediction 45 71 - -
Aed8g0698 296 CDD AP2 77 134 IPR001471 GO:0003700|GO:0006355
Aed8g0698 296 SUPERFAMILY DNA-binding domain 76 134 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0698 Aed-Chr8 6044699 6046446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0698 1 134 AP2-EREBP Transcription Factor Family AT3G16770 55.474 5.15e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0698 AP2 8.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0698 K09286 - gmx:100780763 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0698 8 6044699 6046446 Aed8g0698 8 6044699 6046446 ECH