Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0697 ATGCGGCGGCAGGCAGTGGGCGCCAGTGGATTTGAGTTAAAAACCTTGTACTTGTGCTTCCGCTTAGTAGTATCGTACGAGGACAGCTCAGATTGTATCTGTAGTACAAAAAGCGTGTTTGTATTAGGCAAGGTTTGGCTTGATCCTAATGAGGGCAATGAAATCTCCATGGCCAATTCTCGACAAAACATTAGGAAGTTGGTTAAGGATGGGTTCATCATCAGGAAGCCAACTAAGATTCACTCCCGCTCCCGTGCCCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGCCACTCTGGATATGGTAAGCGTAAGGGTACAAGAGAGGCAAGGCTCCCCACCAAAATCCTTTGGATGAGGAGGATGCGTGTCCTCAGACGATTGCTTCGCAAGTACAGGGAGGCAAAGAAGATTGACAAGCATATGTACCATGATATGTACATGAAGGTGAAGGGTAATGTCTTCAAGAACAAGAGAGTGTTGATGGAGAGCATACACAAGTCAAAGGCTGAGAAGGCAAGAGAGAAGACCTTATCTGATCAGTTTGAGGCCAAGCGGGCAAAGAACAAGGCAAGCAGGGAAAGGAAAAATGCCAGGAGAGAAGAGCGTTTGGCTCAAGGCCCTGGAGAGAAGCCAGCAGCAGCCCCAAGTGCTCCATCTGCAACAGCATCCCAGCCAGCCCAAGCATCAAAGAAATCAAAGCAGAGTAAGTGA 714 0.4874 MRRQAVGASGFELKTLYLCFRLVVSYEDSSDCICSTKSVFVLGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREERLAQGPGEKPAAAPSAPSATASQPAQASKKSKQSK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0697 237 CDD Ribosomal_L19e_E 43 190 IPR033935 GO:0003735|GO:0022625
Aed8g0697 237 MobiDBLite consensus disorder prediction 167 207 - -
Aed8g0697 237 MobiDBLite consensus disorder prediction 83 108 - -
Aed8g0697 237 MobiDBLite consensus disorder prediction 218 237 - -
Aed8g0697 237 SMART Ribosomal_L19e_2 38 169 IPR000196 GO:0003735|GO:0005840|GO:0006412
Aed8g0697 237 PANTHER RIBOSOMAL PROTEIN L19 43 235 - -
Aed8g0697 237 MobiDBLite consensus disorder prediction 167 237 - -
Aed8g0697 237 PANTHER 60S RIBOSOMAL PROTEIN L19 43 235 IPR039547 GO:0003723|GO:0003735|GO:0022625
Aed8g0697 237 Coils Coil 181 204 - -
Aed8g0697 237 Pfam Ribosomal protein L19e 44 168 IPR000196 GO:0003735|GO:0005840|GO:0006412
Aed8g0697 237 Gene3D - 80 211 - -
Aed8g0697 237 MobiDBLite consensus disorder prediction 83 102 - -
Aed8g0697 237 Gene3D - 41 79 IPR015972 GO:0003735|GO:0005840|GO:0006412
Aed8g0697 237 SUPERFAMILY Ribosomal protein L19 (L19e) 43 167 IPR035970 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0697 Aed-Chr8 6039121 6044331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0697 43 222 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 86.413 6.10e-113 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0697 K02885 - gmx:100499883 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0697 8 6039121 6044331 Aed8g0697 8 6039121 6044331 ECH