Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0692 ATGGCGGCATTGTCGTTTTCAGTGGCATCCGTGGTGGAAGATGTGCTTCAACAGCACGGTACTCGCCTCAAAGATCTTGACTTGGAATCTAGAAAAGCAGAAGAAGCTGCATTCAGAAGGTATGAAGCAGCAGGGTGGCTGAGGAAAATGGTTGGAGTCGTTGCAGCTAAAGATTTGCCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTTCTTAATAAAGTTCAACCTGGTGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTAGTCCTCGATGGAGCACCCTTATCGGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGGTGGCTGTGCAGGAAATTGGAGTTCCTACCTTTGAGGCATCTGATCTTGAACAAGGAGGAAAACCAGCCAGGATTGTGAACAGCGTCTTAGCTCTTAAGTCCTATAGTGAATGGAAACAGACTGGGGGTAATGGTGTGTGGAAATTTGGTGGAACTATCAAACCCACAATCTCTGCAAAATCTTTTGTGAGAAAAAACTCCGAACCATTTACTAATTCCTTGTCGAGGAACTCGTCCGTCAATGAAAAATCCATGACCTCTGATTTTGAGTCTAATAAAATGTCTGGGTCTCATTCTTTGAGTATGCTTGTTCGTGCAGTACTATTAGATAAGAAGCCTGAAGAAGTTCCATTGTTGATTGAATCAGTCTTGAATAAGGTCGTAGAGGAGTTTGAGCATCGCATTGCCAACCAGGGTGAACAGGCTGTGTTCTTGGTTATTTATTTATCACGTTACTTGCAGACAAAAAATTCAAAAGGTGCTATGTCCCAAGGCAATGTATCAAAGTTTGTTATGGCAGATAAAAAGATGGAGAACAGGATTCCTATGGTAACAAAGAAAGAAGGATTTCTTCATAAAAAGCATGTTGATGATGAGGAATCAAAAAGACAACTTCTGAAGCAGCAAATGCTCTTTGATCAGCAGCAAAGAGATATTCACGAACTAAAGCATACAATTCACATCACCAAAGCTGGTATGCAGTTCCTGCAAATGAAGTTTCATGAGGAGTTCTCCAATCTAGGCAGGCATGTTCATAGCTTAGCTCATGCTGCTTCTGGATATAATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATAAGGGTGTACTGTCGAGTAAGACCATTCTTATCTGCACAACCAAATTATTCGAGCACAGTGGATAATATAGAAGATGGAACTATCACAATTAGTATTCCTTCAAAGAATGGGAAAGGGCGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCGTCTGCATCCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTACAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGTCGAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAGAGACACTTTTTGCTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGATCAAACAAAAGATATCCTTTTAGCTAA 1680 0.4083 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPVDSALVLDGAPLSAFQYFENVRNFLVAVQEIGVPTFEASDLEQGGKPARIVNSVLALKSYSEWKQTGGNGVWKFGGTIKPTISAKSFVRKNSEPFTNSLSRNSSVNEKSMTSDFESNKMSGSHSLSMLVRAVLLDKKPEEVPLLIESVLNKVVEEFEHRIANQGEQAVFLVIYLSRYLQTKNSKGAMSQGNVSKFVMADKKMENRIPMVTKKEGFLHKKHVDDEESKRQLLKQQMLFDQQQRDIHELKHTIHITKAGMQFLQMKFHEEFSNLGRHVHSLAHAASGYNRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSAQPNYSSTVDNIEDGTITISIPSKNGKGRRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSRGVNYRALSDLFLTADQRRDTFCYDVSVQMIEIYNEQVRDLLVTDGSNKRYPFS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0692 559 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Aed8g0692 559 Gene3D - 24 187 IPR036872 -
Aed8g0692 559 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Aed8g0692 559 ProSiteProfiles Kinesin motor domain profile. 403 559 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed8g0692 559 Coils Coil 16 36 - -
Aed8g0692 559 Pfam Microtubule binding 389 547 IPR031852 GO:0008017
Aed8g0692 559 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 556 - -
Aed8g0692 559 SMART kinesin_4 401 554 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed8g0692 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 555 IPR027417 -
Aed8g0692 559 MobiDBLite consensus disorder prediction 194 214 - -
Aed8g0692 559 SMART ch_5 39 157 IPR001715 GO:0005515
Aed8g0692 559 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 556 - -
Aed8g0692 559 Gene3D Kinesin motor domain 307 558 IPR036961 -
Aed8g0692 559 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0692 Aed-Chr8 6001562 6008200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0692 391 548 Calmodulin-binding Proteins AT5G65930 40.000 4.56e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0692 K10406 - gmx:100801279 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0692 8 6001562 6008200 Aed8g0692 8 6001562 6008200 ECH
Aed8g0692 8 6001562 6008200 Aed2g2419 2 27234963 27239058 ECH