Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0675 ATGGCTCGTCCACGAGCCAACCGACTCTTGTTCCTCCTATGCCTGTTGTGCTATTCTCTCTACGCCATTGCGGGAAAGAGCTATTACGACGTGCTTCAAATACCCAAAGGCGCGTCGGAGGAGCAGATAAAGAGAGCGTACAGAAAACTCGCGTTGAAGTACCATCCCGATAAGAACCCTGGCAATGAAGAAGCCACCAAGAGATTTACCGACATTAACAATGCGTATGAAGTACTCTCGGACAGCGAGAAGAAAAGCATTTACGATAGGCACGGAGAAGAGGGTTTGAAACAACATGCTGCCGGAGGAGGTGGTGGTGGAATGGGAATGGAATTCCAAGATATTTTCAGCTCGTTCTTTGGGGGAGGTCCAATGCAGCAGGAGGAAGAGAGAATTGTGAAAGGTGATGACGTGGTTGTTGAATTGGATGCAGCGCTCGAGGATTTGTACATGGGAGGTTCCTTCAAGGTTTGGAGGGAGAGAAATGTTTATAAGCCAGCACCTGGGAAGAGACGCTGTAACTGTAGAAATGAGGTTTATCACAAGCAAATAGGTCCTGGGATGTTTCAACAGTACACGGAGCAGGTTTGTGAGAAGTGTCCAAATGTTAAATCTGTAAGAGATGGTTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAAGTGCTATCTTTTGAGGATGGTGAGCCCATAATTGATGGAGAGTCTGGAGATCTATGGTTTCGTATCCGTACAGCACGCCATGACCTCTTCAGAAGGGAAGGCAATGACTTGCACACCACTGTTCAAGCACTTGTCGGATTTGAGAAAACTATAAAACACCTAGATGAGCATCTGGTGGACATAAGTGCAAAGGGAATCACAAATCCAAAGCAAGTGAGAAAGCTCAAAGGAGAGGGCATGCCACTGCATATGAGCACAAAGAAAGGAGATCTTCACGTCATGTTTGAGGTTTTATTCCCAACCTCACTAACCGAGGAGCAGAAAACAAATATAATAGCAATTCTTTGA 1023 0.4565 MARPRANRLLFLLCLLCYSLYAIAGKSYYDVLQIPKGASEEQIKRAYRKLALKYHPDKNPGNEEATKRFTDINNAYEVLSDSEKKSIYDRHGEEGLKQHAAGGGGGGMGMEFQDIFSSFFGGGPMQQEEERIVKGDDVVVELDAALEDLYMGGSFKVWRERNVYKPAPGKRRCNCRNEVYHKQIGPGMFQQYTEQVCEKCPNVKSVRDGYFITVDIEKGMQDGQEVLSFEDGEPIIDGESGDLWFRIRTARHDLFRREGNDLHTTVQALVGFEKTIKHLDEHLVDISAKGITNPKQVRKLKGEGMPLHMSTKKGDLHVMFEVLFPTSLTEEQKTNIIAIL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0675 340 CDD DnaJ_C 202 328 - -
Aed8g0675 340 Pfam DnaJ domain 28 89 IPR001623 -
Aed8g0675 340 CDD DnaJ 28 81 IPR001623 -
Aed8g0675 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 255 334 IPR008971 GO:0006457|GO:0051082
Aed8g0675 340 PANTHER BNAA09G39960D PROTEIN 10 339 - -
Aed8g0675 340 PRINTS DnaJ domain signature 47 62 IPR001623 -
Aed8g0675 340 PRINTS DnaJ domain signature 84 103 IPR001623 -
Aed8g0675 340 PRINTS DnaJ domain signature 64 84 IPR001623 -
Aed8g0675 340 PRINTS DnaJ domain signature 29 47 IPR001623 -
Aed8g0675 340 Gene3D - 130 250 - -
Aed8g0675 340 SUPERFAMILY Chaperone J-domain 24 123 IPR036869 -
Aed8g0675 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 133 263 IPR008971 GO:0006457|GO:0051082
Aed8g0675 340 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Aed8g0675 340 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 10 339 IPR044713 GO:0006457|GO:0030544
Aed8g0675 340 Gene3D - 252 325 - -
Aed8g0675 340 Pfam DnaJ C terminal domain 139 325 IPR002939 -
Aed8g0675 340 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Aed8g0675 340 SMART dnaj_3 26 84 IPR001623 -
Aed8g0675 340 Gene3D DnaJ domain 24 129 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0675 Aed-Chr8 5873426 5878585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0675 26 91 C2H2 Transcription Factor Family AT1G74250 42.254 1.10e-09 57.8