Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0663 ATGGTCATTCGTATGGAGAAACGTGTGAATTTGAACTCAAAAAACATCGCGTCCCAATTGCAATCAGAAATTAACCACTCAGCTGAACTGTTACACCCTATGAAATCATCATCAACCAATTTAGCTAGATTCCTGAGTTCAGCCCTTGATACTACTTCTAATATCTCCTTCTCTGATATTGAGAGCAAGGTGGCTCCGTTATTATTTCGGGCATTTGAGACAGTTCCATACTTATCCCAAATCTCGTACATAGGGATGGAAGGTCTCTTTTTCTCGTACTACACTGATCATGATGAAGCTCTAGCTATGTACTCTAACTCATCATCATCTAGTTGGGGTGCCTCAAATATAAGTTATTACATTCAACATGTGAATCGAGAAACTGGAGAGGTTTATGGGGAGGCCATAGACATAATCTCCAACCCCCTTATCAATGCAAGTAAGAATTGGATTGAAGAATTAGCAGTTAATAATGTGTCGACATTGGGAACAAGGTGGGGCAATGATGATAGTGATGTTTTGTTCCTCAATTCAGCTAGAATCACTAGAAAGGGAGTGATCTCTCTTGGGTTTTCAGCAAAGGCAATCACTGATTTTGTCACTCGAATTGACCAACAACAAGGTACGAGGTCCTATTTAGCAACCAAAGATGGAAAAGTTCTTGTGGAAGGGATTCAACATACCCATTTGGTAATTTCTAATGATACGGTTTCACTCCAATCACTGAATTCAAATGGCGATGCCACAAGTAATGAGGGCACTGCCTCGTGCAAGAATGAAGGTGTTGCTTCTCGTTTGAATATTCGGGATACTCCGTATTTAATTCACTGCTACACCATCGATATAATGGGAATACAATCGGTGTATGTCTTGGCTGTCCCACAAAACAGAATTATGAGCTTTGATCACAATTACAAGGAAAAGGGATTGGTTCTGATTGTGGTAACGATGGTTACTATATTTATTGCTTTGTTGAGTTTTGTATTCATAAACTGTAGAGCCATGAGGCGAGAAATGCAGTTGTGTGCCTCACTCATCAAACAGTGTGAAGCCACCCAACAAGCTGAGAAAAAGAATATGAATAAGAGCATCGCTTTTACAAGTGCCAGCCATGATGTTCGCGCCTCTCTCGCAGGCATAACTGGTTTGATAGAGATGTCTTATGAGTTAGTTGTCCCAAGTTCAGAATTGCATACCAATTTGAAACAAATGAATGATTGCACCCAAGACTTACTAGGACTGTTGAATTCTATACTTGACACAAGCAAAATAGAGGCAGGAAAAATGCAACTTGAGGAAGAGGAATTTGATGTGTTCAATCTCCTAGAAGATGTAGTTGACTTTTACTATCCCGTGGCTATGAAGAAAGGTGTAGACCTCGTGTTGGACCCTTGTAATGGTTCTGCTGTGAGATATTCACGCGTGAAAGGTGACAGGGGAAAACTAAAACAAGTTTTGTCTAATTTACTGAGCAATGCTGTCAAATTTACCGATCATGGGCACATAGCGGTTCGTGCATGGACTCGGAAGCCAAAATCGTTGAAGAACTCAACAGTTACTTGTAACCAATTTGGTTTCAAGAAATATTTATCATGCTTGTTTAGTAACAAAAAGGAAGCACATGATGACTTGGAATCCATGCGTTCAATTGACAATGAACATTCGCATTCTATGGATTTTATGTTTGAAGTTGATGACACTGGAAAAGGAATTCCTAAAGAGAATTACAAGTCTGTGTTCGAGAATTACGTCCAAGTCAAAGAAACCGCTCTTGGCCAAGGAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCGTTGGTGCGTTTGATGCATGGAGATATTGAAATTGTGGAGAAGGATACTGGTGAAAAAGGAACATGCTTCAGGTTCAATGTGGTCCTCACTTTATGTGAGAGTGAGGCAATGACAGATGGTAGCACAAGAGAAGATATTGAGTGTGGATCAGGAAACAGAATGCAAGATCAGGGGAATACCATGCATAGTTCAAGTTCTAGTTCTAGAATTTGTTCAATGAGTCCTAGGTTACATATCTGCAGTCCTAAGCCTGAGGCTTCTCTTGTGGTTTTTTTCATTGCTGACGAAGAGCGCCAAAGGGCTTCAAGAAGGATCATAGAGAGGTTAGGGATTAAAGTCAAAGTTGTGAATTCAGGAAAACATTTGTATTACACTCTCAATAAGATCAAGCAAAAGAGTCAGCATTCCAGTGACCAAACTTCTCTAGGGTCTTCAGATTTGAGTTTTCGGTCTAATATGTCATCTCAGAACTCTCTTGCCATAGCCACAACAAGAGTTCCTTTGAGTTCTGTGGATGGAACTGAGCACATGCCTTTAGTTTTCAAGAAGACTGATATTGGAGCTTCCCCTGGCTTCATCCTTATTGTGATTGATGCAAATGCAGGACCATTTTCTGAACTTTATACAATTGTATCAAGCTTCAAGAAAGACCTTCGAAACCCTTGCAAAGTTGTTTGGTTGGATAGGCCATTTATGCGTAGCATCAACTTCAAGGCCATTGATCATGATGATGACATTGTCATATCCAAACCATTTCATGGTAGCCGTTTGTTCCAAACCATAAAGCTTCTTCCTGAGTTTGGTGGTGCTTGGCAACAAAGTAGTAGTAGTTATAGTAAGGATAAGGCTAAGAGGGAAATTACTAATGAGAGAGTTGCATTGAAGACTTATAAGGATCCAAGTTTGTCAAAAAAATACAAGCCTTCTTTATTGGACACATCACAAGTGTCTCCAAGTGATGAAAACAAAATTTGGAAGGGAAATCGGCAATCCAAGGCAAAAAGAAGTCTTGTTCATCATCAAGAAGAAATACAACAAGAGTGTGGGAGCTCACCAGAATCATCAGGGCGCGACAAACCCTTGAGTGGTAAGAAGTTTTTGGTTGTTGAGGACTCTCAATTGTTGAGAAAGCTAGCTTCTGCTACTTTGATTTCTCTTGGTGCAACTTTGGAGCAATGTGAGAATGGTGAACAAGCTGTGGGGCTAGTTGATGAGGGTCTATCTCGGGATTTTCCTATTCCTCCTTATGATTACATCTTAATGGATTGTCAGATGCCAGTAATGGATGGGCTTGAGGCAACAAAGTGGATACGAAAGATGGAGAAAGCGTACGGTGTTCGGATTCCTATAATTGCATTGACTGCATGCACTGAGAAAATGACGACAGAGACAGGAATAGACTTTCATATAGTGAAGCCCATTAGGAGAGAGCATTTACTTGAAGCCATCAGATATATACATGCTAAACCATTCAAGCGCGACACAATGTAG 3306 0.4047 MVIRMEKRVNLNSKNIASQLQSEINHSAELLHPMKSSSTNLARFLSSALDTTSNISFSDIESKVAPLLFRAFETVPYLSQISYIGMEGLFFSYYTDHDEALAMYSNSSSSSWGASNISYYIQHVNRETGEVYGEAIDIISNPLINASKNWIEELAVNNVSTLGTRWGNDDSDVLFLNSARITRKGVISLGFSAKAITDFVTRIDQQQGTRSYLATKDGKVLVEGIQHTHLVISNDTVSLQSLNSNGDATSNEGTASCKNEGVASRLNIRDTPYLIHCYTIDIMGIQSVYVLAVPQNRIMSFDHNYKEKGLVLIVVTMVTIFIALLSFVFINCRAMRREMQLCASLIKQCEATQQAEKKNMNKSIAFTSASHDVRASLAGITGLIEMSYELVVPSSELHTNLKQMNDCTQDLLGLLNSILDTSKIEAGKMQLEEEEFDVFNLLEDVVDFYYPVAMKKGVDLVLDPCNGSAVRYSRVKGDRGKLKQVLSNLLSNAVKFTDHGHIAVRAWTRKPKSLKNSTVTCNQFGFKKYLSCLFSNKKEAHDDLESMRSIDNEHSHSMDFMFEVDDTGKGIPKENYKSVFENYVQVKETALGQGGTGLGLGIVQSLVRLMHGDIEIVEKDTGEKGTCFRFNVVLTLCESEAMTDGSTREDIECGSGNRMQDQGNTMHSSSSSSRICSMSPRLHICSPKPEASLVVFFIADEERQRASRRIIERLGIKVKVVNSGKHLYYTLNKIKQKSQHSSDQTSLGSSDLSFRSNMSSQNSLAIATTRVPLSSVDGTEHMPLVFKKTDIGASPGFILIVIDANAGPFSELYTIVSSFKKDLRNPCKVVWLDRPFMRSINFKAIDHDDDIVISKPFHGSRLFQTIKLLPEFGGAWQQSSSSYSKDKAKREITNERVALKTYKDPSLSKKYKPSLLDTSQVSPSDENKIWKGNRQSKAKRSLVHHQEEIQQECGSSPESSGRDKPLSGKKFLVVEDSQLLRKLASATLISLGATLEQCENGEQAVGLVDEGLSRDFPIPPYDYILMDCQMPVMDGLEATKWIRKMEKAYGVRIPIIALTACTEKMTTETGIDFHIVKPIRREHLLEAIRYIHAKPFKRDTM 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0663 1101 MobiDBLite consensus disorder prediction 657 672 - -
Aed8g0663 1101 CDD HisKA 366 423 IPR003661 GO:0000155|GO:0007165
Aed8g0663 1101 ProSiteProfiles Histidine kinase domain profile. 368 636 IPR005467 -
Aed8g0663 1101 ProSiteProfiles Response regulatory domain profile. 970 1092 IPR001789 GO:0000160
Aed8g0663 1101 SMART HKATPase_4 477 636 IPR003594 -
Aed8g0663 1101 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 416 632 IPR036890 -
Aed8g0663 1101 MobiDBLite consensus disorder prediction 948 962 - -
Aed8g0663 1101 Gene3D - 348 428 - -
Aed8g0663 1101 SMART HisKA_10 361 427 IPR003661 GO:0000155|GO:0007165
Aed8g0663 1101 Gene3D - 946 1095 - -
Aed8g0663 1101 PRINTS Bacterial sensor protein C-terminal signature 560 574 IPR004358 GO:0016310|GO:0016772
Aed8g0663 1101 PRINTS Bacterial sensor protein C-terminal signature 578 588 IPR004358 GO:0016310|GO:0016772
Aed8g0663 1101 PRINTS Bacterial sensor protein C-terminal signature 594 612 IPR004358 GO:0016310|GO:0016772
Aed8g0663 1101 SMART REC_2 969 1088 IPR001789 GO:0000160
Aed8g0663 1101 PANTHER HISTIDINE KINASE CKI1-LIKE 5 1089 - -
Aed8g0663 1101 CDD REC_hyHK_CKI1_RcsC-like 971 1088 - -
Aed8g0663 1101 Gene3D - 429 640 IPR036890 -
Aed8g0663 1101 MobiDBLite consensus disorder prediction 647 672 - -
Aed8g0663 1101 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 429 IPR036097 GO:0000155|GO:0007165
Aed8g0663 1101 Pfam Response regulator receiver domain 972 1089 IPR001789 GO:0000160
Aed8g0663 1101 PANTHER TWO-COMPONENT HISTIDINE KINASE 5 1089 - -
Aed8g0663 1101 MobiDBLite consensus disorder prediction 912 929 - -
Aed8g0663 1101 SUPERFAMILY CheY-like 967 1093 IPR011006 -
Aed8g0663 1101 MobiDBLite consensus disorder prediction 911 965 - -
Aed8g0663 1101 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 635 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0663 Aed-Chr8 5777861 5783197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0663 7 1094 Histidine Kinase Gene Family AT2G47430 39.715 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed8g0663 HATPase_c 3.3e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0663 - - var:108325233 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0663 8 5777861 5783197 Aed8g0663 8 5777861 5783197 ECH