Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0653 ATGTCGCTGCTCGCCGTTTCCACCGGTGGGTTTAAATGGTTGCTCGTGCTGTTATCTTGCATAGTGTTGTTTGTGGTTGATTATGGTGCGTGTGGTAGAACACTGCAACTGGAACTGGAAGCACCTTCTTTGTCTCCAGCTGCAGCACCTGCTGTTGAAGCTGCTCATGATTTGAAGCATTTGCCTGCACCAATTCCTCCACGTGCCAACTTCACCAAAGGGAAAGGACAATTGCAACCTCCGGTTTCTGGGTTTAAGAATATTGCCCCTATGCATCCCATTGCTGATCCAATTGTTGCAAACATGACATGGTGTGGAAACGAGGCAGTGAGGTTTGCCACTCTAGACCTGCTTCTTTTGAATGTCTCTCAAAACCCCGACTGGAATGTTTTTCTTAGTAATGTGGCCACCCAACTTCGGCTGCAGACTACCCAAATTGAGATTATTAAATTTTATCTACTCAGCTTATCAATGTTGAATATATCGATGGATATCACTCCGCATAAAGGGATCAGTTTCTCAGCTGATGAAGCGGCTAAAATAAACTCGTCACTTTTATTACATAAGGTTCAACTAGACCGCAGATTCGTGGGCGACTACCAAGTCATCAATATAACCTGGTTTAAACCTCCACCTCCTTCTCCAGCTCCTACAATTGCTACATCACCTACAAAAGCTCCTCAGAGACGAGCATCTACAACTACATTATCGAGTACTTCAGACAGGGAAAGGCATTCAAACTTGCTAATTATTCTTGGAATTGTCACTGGCGTACTCTTCATTTCCATTGTATGCGTACTTATACTTTGCTTATGCACAATGAGGCCAAAAACAAAAACACCTCCCACAGAAACTGTGGGATACTATAGCAATCGTGACTCGTCACAAAATCTACTTTGTTATGAGCTTGTTCCGAATGGAAGTTTGGAGGCCTGGCTTCATGCACCAGAGTATGCTATGACTGGACACCTACTTGTTAAAAGTGACGTTTATAGCTACGGGGTTGTCTTGCTGGAACTTTTGACAGGAAGGAAACCAGTGGATATGTCACAGCCAAGTGGACAAGAGAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTAGAAGAACTTGCTGATCCAAGGCTAGGGGGAAGGTACCCAAAGGAAGATTTTGTACGTGTCTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGGATCACAGAATCCCATGATCCTGTGTTAGCCTCATCGAATAAGCGACCCAATCTGCGACAGTCCTCTACCACATATGAGTCTGATGGGACATCTTCAATGTTTTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGACTATGACAACATTTCAAGAACGGCTGTTTTCTCTGAAGATCTTCACGAAGGACGATGA 1461 0.4476 MSLLAVSTGGFKWLLVLLSCIVLFVVDYGACGRTLQLELEAPSLSPAAAPAVEAAHDLKHLPAPIPPRANFTKGKGQLQPPVSGFKNIAPMHPIADPIVANMTWCGNEAVRFATLDLLLLNVSQNPDWNVFLSNVATQLRLQTTQIEIIKFYLLSLSMLNISMDITPHKGISFSADEAAKINSSLLLHKVQLDRRFVGDYQVINITWFKPPPPSPAPTIATSPTKAPQRRASTTTLSSTSDRERHSNLLIILGIVTGVLFISIVCVLILCLCTMRPKTKTPPTETVGYYSNRDSSQNLLCYELVPNGSLEAWLHAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITESHDPVLASSNKRPNLRQSSTTYESDGTSSMFSSGPYSGLSAFDYDNISRTAVFSEDLHEGR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0653 486 MobiDBLite consensus disorder prediction 427 456 - -
Aed8g0653 486 MobiDBLite consensus disorder prediction 214 239 - -
Aed8g0653 486 MobiDBLite consensus disorder prediction 221 239 - -
Aed8g0653 486 Pfam Protein tyrosine and serine/threonine kinase 312 417 IPR001245 GO:0004672|GO:0006468
Aed8g0653 486 PANTHER OS01G0750732 PROTEIN 315 486 - -
Aed8g0653 486 Gene3D Transferase(Phosphotransferase) domain 1 272 439 - -
Aed8g0653 486 PANTHER OS01G0750732 PROTEIN 109 284 - -
Aed8g0653 486 PANTHER OS01G0750732 PROTEIN 285 315 - -
Aed8g0653 486 SUPERFAMILY Protein kinase-like (PK-like) 311 425 IPR011009 -
Aed8g0653 486 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 109 284 - -
Aed8g0653 486 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 285 315 - -
Aed8g0653 486 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 315 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0653 Aed-Chr8 5680574 5688043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0653 315 486 Receptor kinase-like Gene Family AT4G02010 86.705 1.75e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aed8g0653 PK_Tyr_Ser-Thr 7.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0653 - - gmx:100792818 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0653 8 5680574 5688043 Aed8g0653 8 5680574 5688043 ECH
Aed2g2286 2 26298966 26307250 Aed8g0653 8 5680574 5688043 PCT