Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0648 ATGGAGAAGAAAGAGATGGCTGTGAAAACTGAGGATGCGGTTATTGGGTCCTCTTCTTCTTTCCCTTGTTATAATTCAAACGTTTATAATCCGTTCTCGAACCACTGTGATTTCTCTGAGGAGGACAAAAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTATAGTCCTCTGCTTGAGTTACCTCAACTTTCAACTGTGTCTGTTCAACCTTATCATCATCACTCTACAGTTAATAAGGTTCCGTCTGAAAAAGAGTGTTCCGAGGTGTTGAACCACCAACCTGCCACTCCAAACTCTTCTTCCATTTCATCCGCCTCCAGTGATGTTGCAGTCAATGATGAACAGAATAAGACTCTAGACCAAGCAGAAGAAGAAGATGATGACGAAGAAGAACAACAAACACTGCAGAAGACTAAGAAACAGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGTGTTGTAGTGACAACCTACGAAGGCCAACACACTCATCCAAGCCCAGTTATGCCTCGCTCAGGCGGTGTCTCCGCTGGATACGCCGCCACCAACTTGGGTTCAGTTTTGCAACCAGGAAACTACTACTTATCCCAGTATCAGCACCAACAACAACATCATCAACAACAACTACTTGTCAACACATTGTCCTCATTGGGCTTCCCTTACAACGATTCTTCATCATCTCCAAAGAACGCTGTTTTTACTCATCAAGAGACAACTGCGTTTCTGAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 831 0.4404 MEKKEMAVKTEDAVIGSSSSFPCYNSNVYNPFSNHCDFSEEDKSSLGFMELLGVQDYSPLLELPQLSTVSVQPYHHHSTVNKVPSEKECSEVLNHQPATPNSSSISSASSDVAVNDEQNKTLDQAEEEDDDEEEQQTLQKTKKQSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGGVSAGYAATNLGSVLQPGNYYLSQYQHQQQHHQQQLLVNTLSSLGFPYNDSSSSPKNAVFTHQETTAFLRDHGLLQDVVPSHMLKEE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0648 276 MobiDBLite consensus disorder prediction 92 119 - -
Aed8g0648 276 Gene3D WRKY domain 131 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed8g0648 276 PANTHER WRKY TRANSCRIPTION FACTOR 1 141 - -
Aed8g0648 276 PANTHER WRKY TRANSCRIPTION FACTOR 144 268 - -
Aed8g0648 276 ProSiteProfiles WRKY domain profile. 144 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g0648 276 Pfam WRKY DNA -binding domain 137 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g0648 276 SUPERFAMILY WRKY DNA-binding domain 140 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed8g0648 276 SMART WRKY_cls 139 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g0648 276 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 141 IPR044810 GO:0003700
Aed8g0648 276 MobiDBLite consensus disorder prediction 77 142 - -
Aed8g0648 276 Coils Coil 115 135 - -
Aed8g0648 276 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 268 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0648 Aed-Chr8 5620834 5625079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0648 20 276 WRKY Transcription Factor Family AT3G62340 33.099 2.07e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed8g0648 WRKY 6.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0648 - - gmx:100784158 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0648 8 5620834 5625079 Aed8g0648 8 5620834 5625079 ECH
Aed2g2290 2 26348760 26350112 Aed8g0648 8 5620834 5625079 PCT