Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0639 ATGGAGACGATGAGAAGCTTATCAGACATTAGTGACCCATCTGCTACATATGCAAGTGAAGAAGAAATGGTAATTAAGAAAGGTCCATGGACTGAGGAAGAAGATTCTGTTCTGTTCAACTATGTCAACGTCCACGGCGAAGGTCACTGGAACTCCCTCGCTCGCTCTGCAGGTCTAAAGCGAACGGGGAAAAGCTGCAGACTAAGATGGTTGAACTACTTGCGTCCAAATGTTCGACGTGGGAACATCACCCTTCAGGAACAGCTCTTGATTCTCGAACTCCATTCCCGTTGGGGCAATCGGTGGGCTAAAATAGCAGAAGAATTGCCAGGGAGAACAGACAATGAGATAAAGAACTATTGGAGGACACGAGTGGTGAAGCAGGCAAAGCAACTCAAATGTGATGTAAACAGCAAACAGTTCAGGGACGCGGTGCGTTTTGTTTGGATGCCGCGCCTTATGGAGCAGATTCAGGCTTCTTCTTCCTATGGCCTTGATCAAACAACATTGTGCAACACACAAACCCACGCTGAATCTAGTGGGGCCAATAATCCCATAATGTTTTGTGACTACTCAACTGAGGTTGATGTTCAGCCTCCCTCAGCCTCTCTCTCCAACACAAACACAACTTCATCTTACAACTTAATGGGTCATGATGATAATGAAGAAAACGGGTCCATGTCCTCCTTCCTTTGGCAGCAATTGGACTACGACTCTGACATCCAAGCATTTCAACCATGCAATGCTTTTAGTGATCATGCAGAGTTGTGGACCGATGAAAGCATATGGTTCTTGCAGCAGAATCTTGCTCATCACTTGTGA 822 0.4599 METMRSLSDISDPSATYASEEEMVIKKGPWTEEEDSVLFNYVNVHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILELHSRWGNRWAKIAEELPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDAVRFVWMPRLMEQIQASSSYGLDQTTLCNTQTHAESSGANNPIMFCDYSTEVDVQPPSASLSNTNTTSSYNLMGHDDNEENGSMSSFLWQQLDYDSDIQAFQPCNAFSDHAELWTDESIWFLQQNLAHHL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0639 273 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Aed8g0639 273 SMART sant 79 127 IPR001005 -
Aed8g0639 273 SMART sant 26 76 IPR001005 -
Aed8g0639 273 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 15 267 - -
Aed8g0639 273 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Aed8g0639 273 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Aed8g0639 273 Gene3D - 84 125 - -
Aed8g0639 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 129 IPR017930 -
Aed8g0639 273 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 267 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aed8g0639 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
Aed8g0639 273 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Aed8g0639 273 CDD SANT 29 74 IPR001005 -
Aed8g0639 273 Gene3D - 24 80 - -
Aed8g0639 273 SUPERFAMILY Homeodomain-like 25 121 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0639 Aed-Chr8 5552356 5554115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0639 25 162 MYB Transcription Factor Family AT1G48000 73.913 1.95e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed8g0639 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0639 K09422 - gmx:100777932 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0639 8 5552356 5554115 Aed8g0639 8 5552356 5554115 ECH
Aed2g2301 2 26411361 26412979 Aed8g0639 8 5552356 5554115 PCT