Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0631 ATGGTGGCTGAAGCAGAGGTTATCTGTCAGCAAAACGTGATTGTGTTGGATGTGATGAAGCATTTTCCAAATAAGGGAAGCGATGATCACAAGATCGGAGATGCAGATGCTAATTCTCCTCCGAATTTTGACCGAGTTCGTGCGACTGAGTTGGTCTCCGCCGAGTTACTACTCACTTCACAAGAAGATGCTAAGTCTGCGGACAGGATCTTAGATGCTGCTCTAGAATCTGCGGTTCTGCAGTTTAACCCTTGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCTCATATGGGATCACTATACAATTTTCCCAAACCAAGTGCCTTTTTTGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATAAGGAAAAACGTGATAAAATTCTTCTTTGAGGATGTCAATTTCCCACAGACATCTGAAGTTGATAACGTATTTTTGGAAGAGGTAGAGGATTCCCTCAGAAAGGCGTTTCTTTTGGCTGACTCAGCTTTGGCCGATGATTGCAGTGTGAATACTTCATCCGGCACCACGGCCCTTACTGCTTTGATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGACTGCCGAGCAGTTCTCTGTCGCAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATTTATCCATCAGAGCGGAGGCGAGTTGAAGAACTGGGTGGCTACATAGATGATGGTTATCTCAATGGGGTTTTATCAGTTACTAGAGCGCTAGGGGACTGGGACATGAAGTTACCTAAGGGTGCTCCCTCACCTTTGATTGCAGAGCCTGAGTTCCGGCAAGTGGTTCTAACAGAGGATGATGAATTCCTCATCATAGGATGCGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAGCCTTGTCCGCAAAGGCCTGAGGCGGCACGATGATCCGGAGAAATGTGCCAGGGACCTGGTTATGGAGGCGTTACGCCTGAACACATTTGACAATCTCACGGTTATCATTGTATGTTTCTCTTCCCTTGACCATGCAGAGCCGGAACCGTCCCCTCCTCGCCAGCGAAAACTGAGATGCTGTAGCCTCTCCGCAGAGGCTCTCTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCTAGCAACTGA 1197 0.4779 MVAEAEVICQQNVIVLDVMKHFPNKGSDDHKIGDADANSPPNFDRVRATELVSAELLLTSQEDAKSADRILDAALESAVLQFNPCIRSGSFADIGPRRYMEDEHIRIDDLSSHMGSLYNFPKPSAFFGVFDGHGGPEAAAYIRKNVIKFFFEDVNFPQTSEVDNVFLEEVEDSLRKAFLLADSALADDCSVNTSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEELGGYIDDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHAEPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0631 398 SUPERFAMILY PP2C-like 80 359 IPR036457 -
Aed8g0631 398 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 380 - -
Aed8g0631 398 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Aed8g0631 398 CDD PP2Cc 86 357 IPR001932 -
Aed8g0631 398 Gene3D - 55 363 IPR036457 -
Aed8g0631 398 SMART PP2C_4 77 355 IPR001932 -
Aed8g0631 398 ProSiteProfiles PPM-type phosphatase domain profile. 87 357 IPR001932 -
Aed8g0631 398 Pfam Protein phosphatase 2C 97 349 IPR001932 -
Aed8g0631 398 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0631 Aed-Chr8 5471707 5474944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0631 100 394 PP2C-type Phosphatase Gene Family AT3G62260 71.284 3.43e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0631 K14803 - gmx:100819791 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0631 8 5471707 5474944 Aed8g0631 8 5471707 5474944 ECH