Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0628 ATGGGTAGATTTGTACACATGGTTGTAATGCTCTCTAGCTTTGTTCTAATGATATCATTTGCCTCCGCATCTTTGAAGGTGGATTTCTATAAAACTACGTGTCCATCTGCTGAGGCAATAGTAAGAAGAGCCGTAAACAAAGCAGTTTCTCTAAACCCAGGCATTGCTGCTGGTTTGATCAGAATGCATTTCCATGATTGTTTTGTCAGGGGATGTGATGGTTCAGTACTATTAGAATCCACAGCGGGTAACCCATCGGAGAGAGAGCACCCAGCCAACAACCCAAGCTTACGTGGCTTCGAAGTCATCGATGAAGCCAAGGCCCAATTAGAGGCTGAGTGTCCTCAAACGGTGTCGTGCGCAGACATTCTCGCCTTTGCTGCTCGAGACAGCTCCAACAAAGTGGGAGGCATAAAGTACGAGGTACCATCAGGACGCAGAGACGGTCGTGTCTCAAACAGAGACGAAGCGTCACAACTGCCCCGTCCAACCTTCAACGCAGCACAACTTATTCACAACTTCGAACAAAAAGGGTTGTCTGCAGATGAAATGGTGACACTCTCTGGAGCACATTCCATTGGTGTCTCACACTGTTCCTCCTTCTCCGACCGCTTGTACTCTTTCAATTCAACGTTTTCTCAAGACCCCTCTATGGACCCTAACTTTGCCACGTCATTGAAAAGCAAGTGTCCACCACGGAGTGAAAACACGGTGGCGCTTGATGCTTCCACACCTAACCGTTTGGACAGCAACTACTACACGATGCTCAAGAACCACCGTGGTTTGTTGACCTCAGATCAGACGTTGTTGACCAGTTCCTCAACGAGCTCAATGGTGCAAACCAATGCTAAACATGGTTCAACTTGGGCACGCAAGTTTGCTAAGGCAATGGTGCATATGGGTTCTATTCAAGTGCTTACCGGCTCACAAGGCGAGGTCAGGACCCGTTGTAGCGTTGTTAATTAA 966 0.4783 MGRFVHMVVMLSSFVLMISFASASLKVDFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLESTAGNPSEREHPANNPSLRGFEVIDEAKAQLEAECPQTVSCADILAFAARDSSNKVGGIKYEVPSGRRDGRVSNRDEASQLPRPTFNAAQLIHNFEQKGLSADEMVTLSGAHSIGVSHCSSFSDRLYSFNSTFSQDPSMDPNFATSLKSKCPPRSENTVALDASTPNRLDSNYYTMLKNHRGLLTSDQTLLTSSSTSSMVQTNAKHGSTWARKFAKAMVHMGSIQVLTGSQGEVRTRCSVVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0628 321 PANTHER PEROXIDASE 25-RELATED 16 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Aed8g0628 321 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PANTHER PEROXIDASE 16 319 - -
Aed8g0628 321 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Aed8g0628 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g0628 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Aed8g0628 321 Gene3D - 28 321 - -
Aed8g0628 321 Gene3D Peroxidase, domain 2 161 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0628 Aed-Chr8 5459955 5461043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0628 1 321 Peroxidase AT4G11290 44.785 2.45e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0628 K00430 - gmx:100813563 553.518