Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0609 ATGAAGAAGAAGAACCGTCTCTCCTTCCTCTTCTCCCTCTGTTCTTTCTTCTTCACTCTCGTCGTAACCGAAACAGACCCAAACGACGTGAAGATCCTCAACACATTCAAAAGCGGCTTAAAGAACCCAGAGCTCTTACCATGGCCCGACGAAGGAGGAGACCCGTGCGGCACCCCTCCCTGGAGATACATCTACTGCAACAACAACAGAGTCACCCAGATTCAGACCAAAAACCTGGGCCTGGAGGGCCCACTTCCCCAGAACTTCAACCGCCTCACCATGCTCGAGAATCTGGGCTTGCAGAACAACAAGCTCACCGGCCCATTACCTTCCTTCAACGGCCTCACCAACTTAAAATACGCCTTCCTCAACCACAACAACTTCGACTCCATCCCTGAGAACTTCTTCGTGGGACTCAAAAATCTCGAGGTTCTTGCTTTGGATTACAACGTAAACCTCAACGCCACCACCAACGGCTGGACCTTCCCGCCGACGCTGCGCGACTCGGCGCAGCTGAGAAACTTGACATGCCTCAGCTGCAACTTAGTGGGCCCCATTCCGAGCTTCCTCGGCGACATGGCGTCGCTGTCGGTGCTGCTTCTCTCCGGAAACAACCTCACCGGCGAGATTCCGGCGACGCTGGGCGCCGTCCCGGCGCTGCAGTCTCTCTGGCTGAACAACCAACGTGGAGACGGACTAACCGGAAAAATCGACGTTGTCGCGAGTATGGTTTCGTTGAATAGTCTTTGGCTTCACGGAAACAAGTTTGGAGGGAGTATACCATTAAACATTGGTGATTTGGTTTCTCTGAAGGATTTGGATCTTAACGGGAATGAGTTGGTTGGGTTGATTCCGAGTGGCTTGAGTGAAATGAATTTGGATAGGTTGGATTTGAATAACAACCACTTCATGGGTCCGATCCCGGAGTTTGCAGCGGGGAATGTGAGTTTCGATAACAACGGGTTCTGTGAGAGTAAGGCTGGGGTTAACTGTGCTTTTGAGGTGATGGCGCTGTTGGAGTTTCTTGGCGGGTTGGGGTATCCTAGGATTCCGTCTCATTCGTGGAGTGGGAGTGATGACCCTTGTGATGGACCATGGTTGGGGATAAGGTGCAATAGGGGTGGGAAAGTGGAAATGATTCTCTTGGAAAAGTTTAATCTTAGTGGGACTTTGAGTCCTTCTGTTGCAAAGTTGGATTCTCTCGTTGAGATTAGGTTGGGTGGTAATGATATCAGTGGTGCGATACCTAGTAATTGGACCAGCTTGAGATCTTTGACATTGTTGGATCTCAGTGGGAACAACATTTTGCGTCCCTTGCCGAGTTTCCGGAAAGAGTTGAAGCTTGTTATTGATGGGAATCCTAAGTTGAGTGCCCCGGAAGGTCCTGTTTCTTCACCTGGTTCGGGTTCGGGTTCACCGTCTACAAAGGGTGAATCTCCTTCGACTGATAAGCATAATCATAATCCTAATCCTAATCCATCTGAAGAGTCTAGTCACAACCCCCAGGGCATTAGTAGTTCTATTGAGTCAGACAATTCCATAGGGACAAGCTTGGTTCTAATTGTGGCTCCTATTGTAGGTGTTGCAGCTGCGGCTTTTGTGCTTATTCCGCTTTACATGTACTGTTTCAGGAAGAAAAAGGGTGTCACTGAGGGTCAAGGGTCGTTAGTGATTCACCCTAGGGATGCTTCTGATCCGGACAATGTGTTGAAGATTGTTGTTGCTAAGAACAGCAACGGGAGTGTTTCCACGGTGACCGGCAGCGGGTCTGGGACCGTGAACGGAAGTGGCGAGTCCCGTATCTTTGAAGCCGGGAAGCTTGTGATATCGGTTCAGGTTCTTCGAAACGTGACCAAGAATTTTGCACGGGAGAACGAGGTTGGACGCGTGACAGGAAAAGTCACTACGAAAGCAGATGTTTTCAGTTTTGGCGTTGTCCTAATGGAGCTGTTAACTGGATTAATGGCACTTGATGAGGATAGGCCCGAGGAAAGCCAATACCTGGCGTCGTGGTTCTGGCATATAAGACTAGACAAGGATAAACTAATGGCGGCGATTGACCCAGCCCTCGAAATTAAGGAAGAAATGTTCGATATCGTCTCCATCGTTGCTGAGCTAGCCGGGCACTGCACTGCCAGAGAACCAAACCAGAGGCCAGATATGGGCCATGCTGTGAACGTTCTCGTGCCGCTTGTTCAGAAATGGAAGCCGTTAGATGATGACACCGAGGAGTATTCCGGCATAGATTACAGTCTTCCCCTTAACCAAATGGTGAAGGACTGGCAGGAGACAGAAGGAAAGGACTTGAGCTATGTGGACCTACAGGACAGTAAGAGTAGTATCCCTGCAAGGCCTACCGGGTTTGCCGAGTCTTTCACTTCCGTCGATGGCCGGTGA 2397 0.5006 MKKKNRLSFLFSLCSFFFTLVVTETDPNDVKILNTFKSGLKNPELLPWPDEGGDPCGTPPWRYIYCNNNRVTQIQTKNLGLEGPLPQNFNRLTMLENLGLQNNKLTGPLPSFNGLTNLKYAFLNHNNFDSIPENFFVGLKNLEVLALDYNVNLNATTNGWTFPPTLRDSAQLRNLTCLSCNLVGPIPSFLGDMASLSVLLLSGNNLTGEIPATLGAVPALQSLWLNNQRGDGLTGKIDVVASMVSLNSLWLHGNKFGGSIPLNIGDLVSLKDLDLNGNELVGLIPSGLSEMNLDRLDLNNNHFMGPIPEFAAGNVSFDNNGFCESKAGVNCAFEVMALLEFLGGLGYPRIPSHSWSGSDDPCDGPWLGIRCNRGGKVEMILLEKFNLSGTLSPSVAKLDSLVEIRLGGNDISGAIPSNWTSLRSLTLLDLSGNNILRPLPSFRKELKLVIDGNPKLSAPEGPVSSPGSGSGSPSTKGESPSTDKHNHNPNPNPSEESSHNPQGISSSIESDNSIGTSLVLIVAPIVGVAAAAFVLIPLYMYCFRKKKGVTEGQGSLVIHPRDASDPDNVLKIVVAKNSNGSVSTVTGSGSGTVNGSGESRIFEAGKLVISVQVLRNVTKNFARENEVGRVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEESQYLASWFWHIRLDKDKLMAAIDPALEIKEEMFDIVSIVAELAGHCTAREPNQRPDMGHAVNVLVPLVQKWKPLDDDTEEYSGIDYSLPLNQMVKDWQETEGKDLSYVDLQDSKSSIPARPTGFAESFTSVDGR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0609 798 Gene3D Ribonuclease Inhibitor 26 329 IPR032675 -
Aed8g0609 798 SUPERFAMILY Protein kinase-like (PK-like) 632 729 IPR011009 -
Aed8g0609 798 Gene3D Transferase(Phosphotransferase) domain 1 607 748 - -
Aed8g0609 798 PANTHER OSJNBA0070M12.3 PROTEIN 5 629 - -
Aed8g0609 798 MobiDBLite consensus disorder prediction 456 508 - -
Aed8g0609 798 Pfam Leucine rich repeat N-terminal domain 336 372 IPR013210 -
Aed8g0609 798 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Aed8g0609 798 MobiDBLite consensus disorder prediction 778 798 - -
Aed8g0609 798 SUPERFAMILY L domain-like 25 309 - -
Aed8g0609 798 MobiDBLite consensus disorder prediction 463 508 - -
Aed8g0609 798 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 5 629 - -
Aed8g0609 798 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 630 798 - -
Aed8g0609 798 SMART LRR_typ_2 115 138 IPR003591 -
Aed8g0609 798 SMART LRR_typ_2 267 291 IPR003591 -
Aed8g0609 798 SMART LRR_typ_2 193 217 IPR003591 -
Aed8g0609 798 SMART LRR_typ_2 422 444 IPR003591 -
Aed8g0609 798 SMART LRR_typ_2 92 114 IPR003591 -
Aed8g0609 798 SUPERFAMILY L domain-like 334 446 - -
Aed8g0609 798 Gene3D Ribonuclease Inhibitor 333 460 IPR032675 -
Aed8g0609 798 PANTHER OSJNBA0070M12.3 PROTEIN 630 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0609 Aed-Chr8 5213644 5217878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0609 81 551 Receptor kinase-like Gene Family AT4G08850 26.667 9.11e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed8g0609 LRRNT_2 9.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0609 - - gmx:100803759 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0609 8 5213644 5217878 Aed8g0609 8 5213644 5217878 ECH
Aed2g2031 2 24721992 24725779 Aed8g0609 8 5213644 5217878 PCT