Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0579 ATGTCCAGTTCCAGAAAAAAACTGGTCCTGAACACCGTGTCCGTGAACCTGGGCTGCGGCAGCTGCAGGCGGCCCAGACTCTTGCGGAACATATTTCGCTTGAGGCGGGGGCCCAAGAAGCCCGTGTACCGGACTAACGGTCACGGGCTCCATTGGGACGATACTGCAACGAGCAGTACTGTCACCAACGCCTCCTCCGCCGCCACGTTTTCGCCCTGCTATGCAGAGGCCTCGGTGCAGTTCAATGATTACGCCGAGACCGCAAGAGCGCTGGGACGAGGAGGCGTGGCGGTGGAGAAGGACTCTGATGATCCTTACTTGGACTTCAGACACTCCATGCTCCAGATGATTCTGGAGAATGAGATGTACTCAAAGGACGATCTGAGAGAGCTTCTCAACTGTTTTCTTCAGCTCAATTCGCCGGACAACCATGGGGTTATTGTTAGAGCCTTCACTGAGATCTGGAATGGTGTTTTCTCCGTGAAGTCTGGCTCTTCCACTGGGTTCCACCTCAACCGTAAGTCACGTGACTTCTAG 537 0.5475 MSSSRKKLVLNTVSVNLGCGSCRRPRLLRNIFRLRRGPKKPVYRTNGHGLHWDDTATSSTVTNASSAATFSPCYAEASVQFNDYAETARALGRGGVAVEKDSDDPYLDFRHSMLQMILENEMYSKDDLRELLNCFLQLNSPDNHGVIVRAFTEIWNGVFSVKSGSSTGFHLNRKSRDF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0579 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 166 IPR038933 GO:0045892
Aed8g0579 178 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
Aed8g0579 178 Pfam Transcriptional repressor, ovate 102 158 IPR006458 -
Aed8g0579 178 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Aed8g0579 178 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0579 Aed-Chr8 4986527 4987063 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed8g0579 Ovate 2.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0579 - - gmx:100786450 287.73