Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0578 ATGAAGTTTTTTTCTCTTTTGAGAAGAAGAGATGTCAGATCCTGCTCATCTTCACCGTGGGCTTGGCCATCCTGCAACCAATCCAAAACCCTCTCTTTCAGGGTCACCACCACCAACACCAAAAATAGCCACCCCAACGACAATGACGATGAAAACGATAACAGTGTTTTGCGAAACATTAACTCAGCGATAGTGTCGCAAACACCGGAGTCGTTTTTCACCGAGTCCCCAGACTCCGCGAGCTTCTCGACAGCGTCTGAGCTGTCGGACCCCGTCGAGACGGTGATCCGCGGCCTGCGTTCCGACCGGCTTTTCTTCGAGCCGGACGAGGCCAGCAGAAGCATATTGGAGGCCAACAAATTGACAACGGCGACGGTGGCGACAACCACGACGGACAGCCTCCCGGTGGTGCCGTTCAAAAACAGCGTCGCTCTGACAGTGGACTCGATCGAGCCTTATGCAGATTTCCGCAAGTCCATGGAGGAGATGATGGAGACTGTTGGCGCAGAAGACTGGGAGAGTCTGGAGGACCTTCTATGCTGGACGAGATTACAGAAGAAGAAGATGAATCTTCTTACAACTGATATCATTTAG 594 0.5202 MKFFSLLRRRDVRSCSSSPWAWPSCNQSKTLSFRVTTTNTKNSHPNDNDDENDNSVLRNINSAIVSQTPESFFTESPDSASFSTASELSDPVETVIRGLRSDRLFFEPDEASRSILEANKLTTATVATTTTDSLPVVPFKNSVALTVDSIEPYADFRKSMEEMMETVGAEDWESLEDLLCWTRLQKKKMNLLTTDII 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0578 197 Pfam Transcriptional repressor, ovate 149 181 IPR006458 -
Aed8g0578 197 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 181 IPR038933 GO:0045892
Aed8g0578 197 ProSiteProfiles OVATE domain profile. 145 197 IPR006458 -
Aed8g0578 197 PANTHER TRANSCRIPTION REPRESSOR OFP13 12 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0578 Aed-Chr8 4971598 4972428 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed8g0578 Ovate 8.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0578 - - gmx:100816044 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0578 8 4971598 4972428 Aed1g1820 1 15616843 15617577 ECH
Aed8g0578 8 4971598 4972428 Aed8g0578 8 4971598 4972428 ECH
Aed2g2019 2 24629797 24630585 Aed8g0578 8 4971598 4972428 PCT