Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0542 ATGGCCACTTGTGTGTCAACAATTTTTGCACCTTCTAATACTAGAAATTCACCAAGGGTGTTGACTGTTGGAGGAAGAAATCTGACTTGGAATTACCCTGGGAGAGCTTGTATCACGAAAGTGTATGACCGCAGAAATGGATTTTCCAGTGGCGTCCGAATGTCGGGTTTACTCCAAGTTAAGTGTTCGGCCAATTCGCACAGTGTCAGTCCATACAGTAGCCAAGGCCCATTTCTAGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGGGAGCAGTACAGTGAACAGCCCGAGAAAGGATAGCTCAGGTGGGGATTTATCTGAGAGCCTAGGAACTACATCTACTCAAAGTGATTACAACGAAGCAAAGATCAAAGTTATTGGCGTTGGAGGCGGTGGGTCAAATGCAGTCAATCGCATGATAGAAAGCGAAATGCACGGTGTGGAGTTTTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCTATCCTGAGAACCGTTTGCAAATTGGTCAAGAGCTTACGCGGGGTCTTGGCGCCGGTGGTAACCCTGAGACTGGAATGAATGCTGCGAAAGAAAGCAAAGAATCGATAGAAGAGGCAGTCTATGGAGCCGATATGGTCTTTGTTACAGCTGGAATGGGTGGGGGAACTGGCACAGGTGGAGCTCCAATTATTGCTAGTATTGCAAAGTCAATGGGTATACTGACGGTTGGTATTGTCACCACCCCTTTCTCGTTCGAAGGAAGAAAGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCTTTAAGAGATAATGTTGACACGCTTATAGTTATCCCAAATGACAAGCTACTAACAGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATTTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGAAAATCAAGGGCAAGAGATGCTGCATTAAATGCCATCCAGTCACCTTTACTAGATATTGGTATAGAGAGGGCTACTGGAATTGTTTGGAACATAACTGGTGGGACTGATCTGACCTTGTTTGAGGTAAACGCTGCAGCAGAGGTTATATATGACCTTGTGGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCACTGGTCAAGTGAGCATAACATTGATTGCAACTGGATTTAAGCGTCAAGAGGAGAGTGAAGGGAGGCCCCTGCAGGCCAGCCAACTCACTCAAACAGATACAAGCTTCAGCGTGAACAGGCGATCTTCCTCTTTCACCGATGGTGGTTTGTTCGAAATACCCGAATTCCTAAAGAAGAAAGGAGGTTCACGCTATCCAAGGGCATAA 1455 0.4474 MATCVSTIFAPSNTRNSPRVLTVGGRNLTWNYPGRACITKVYDRRNGFSSGVRMSGLLQVKCSANSHSVSPYSSQGPFLDLHPEVSMLRGEGSSTVNSPRKDSSGGDLSESLGTTSTQSDYNEAKIKVIGVGGGGSNAVNRMIESEMHGVEFWIVNTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLTGQVSITLIATGFKRQEESEGRPLQASQLTQTDTSFSVNRRSSSFTDGGLFEIPEFLKKKGGSRYPRA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0542 484 MobiDBLite consensus disorder prediction 90 117 - -
Aed8g0542 484 SUPERFAMILY Tubulin nucleotide-binding domain-like 124 322 IPR036525 -
Aed8g0542 484 ProSitePatterns FtsZ protein signature 2. 211 232 IPR020805 GO:0005525
Aed8g0542 484 CDD FtsZ_type1 136 428 IPR000158 GO:0003924|GO:0005525
Aed8g0542 484 Hamap Cell division protein FtsZ [ftsZ]. 121 437 IPR000158 GO:0003924|GO:0005525
Aed8g0542 484 Pfam FtsZ family, C-terminal domain 336 430 IPR024757 -
Aed8g0542 484 PRINTS Cell division protein FtsZ signature 303 325 IPR003008 GO:0005525
Aed8g0542 484 PRINTS Cell division protein FtsZ signature 212 232 IPR003008 GO:0005525
Aed8g0542 484 PRINTS Cell division protein FtsZ signature 240 261 IPR003008 GO:0005525
Aed8g0542 484 PRINTS Cell division protein FtsZ signature 326 347 IPR003008 GO:0005525
Aed8g0542 484 Gene3D Tubulin/FtsZ, GTPase domain 114 334 IPR036525 -
Aed8g0542 484 Gene3D - 335 444 IPR037103 -
Aed8g0542 484 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 482 IPR045061 GO:0003924|GO:0005525
Aed8g0542 484 SMART Tubulin_4 125 319 IPR003008 GO:0005525
Aed8g0542 484 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 482 - -
Aed8g0542 484 SUPERFAMILY Tubulin C-terminal domain-like 318 432 IPR008280 -
Aed8g0542 484 TIGRFAM ftsZ: cell division protein FtsZ 116 444 IPR000158 GO:0003924|GO:0005525
Aed8g0542 484 MobiDBLite consensus disorder prediction 89 117 - -
Aed8g0542 484 Pfam Tubulin/FtsZ family, GTPase domain 125 286 IPR003008 GO:0005525
Aed8g0542 484 SMART Tubulin_C_4 321 438 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0542 Aed-Chr8 4671953 4677794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0542 215 423 PP2C-type Phosphatase Gene Family AT1G75010 23.874 1.80e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0542 K03531 - gmx:100784356 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0542 8 4671953 4677794 Aed8g0542 8 4671953 4677794 ECH