Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0541 ATGGTGATGATGCCGGAGTTGGAGATGAATTCCCAGAACGAGGTGGAATCGCCGCTACAATTGGAGGAGCAGCAGAGCAACAAGATCAACCGTCCATTCTCGTCGCCGGGAAGGCAGTCTTCGATATACTCACTGACGCTCGACGAGTTCCAGCACACGCTATGGGAGAGTGGCAAGAACTTCGGGTCGATGAACATGGATGAGTTCCTCAGCAGCATATGGAGTGCAGAAGAGAATCATCAAGTTCTGAACAACAACAACAACACCAACAACAACCACAACTTGTCGCTGAGCCAAGCCTCCGCGGAGAGAGGAGTGATAAGGAAGCAACCGAGTCTTCCTCGTCAAGGCTCCCTAACTCTTCCCTCGCCTCTGTGTCGGAAGACAGTGGACGAGGTTTGGTCTGAGATACACGGAGGACAACAACATTCTCAGCAACCGCAGCAGAACAACAATTGTGGCGGTACTGGTGGTAATAATAATAATAATAATACTAATAATAATAATAATAATAATAACAACGTGCAGAGTACCGAATCTGTCCCTCGCCAGCCTACTTTTGGAGAGATGACTTTGGAGGATTTCTTGGTTAAAGCTGGGATAGTTAGGGAACAGTGTGGAATGGCTGCTGCAATGCCTTTTCAAGCTTCTTCACTTCAGCATATGCAGCAGTATGGCATGTTTCCAAATAGCAACCCTGTCATGGGGCCTTCTTTTGTCGGTAGGCCGGTGATGGGGATAGCCGGTGGCAGCGGTGGTGGTGGGAATGTGGTTGCACCGTCTTATCAGGGTGGTGTTGGTGGTGCAATTGGAGAGTCTTCTGGGTATCCGGCGGTGGTGCCGCCACCGGGGGTTTGCTTTGGAGGGAGGGTGGTGAATGGTGGCGTTGGCGGATATGCGGCGGTGAGTAATATGGGAATGGTGGCGCCAGTGAGTCCAGTTTCGCCGGAGGGGATAGGAACCGGCGAAAACTCTGGTGGTTGTGGTGGTGGTCAGTTTGGGATGAACATGAGTGTGTTGAGAGGGAGAAAGAGGGTGTTGGATGGTCCTGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCTAGAGCAAGAAAACAGGCATACACTGTTGAATTAGAAGCAGAATTGAATCAATTGAAAGAAGAGAATGTCCAACTTAAACTAGCTCTGGCTGATCTTGAGAGGAGAAGAAAGCAACAGCATTTAGAGGAAGTGAATGAGAGAGTTCAAACTAACAATTCTCAGCAGAGCAAAAAGAAATTGAGATCATTGAGAAAGACCCTAAGTTGCCCTTCATGA 1332 0.491 MVMMPELEMNSQNEVESPLQLEEQQSNKINRPFSSPGRQSSIYSLTLDEFQHTLWESGKNFGSMNMDEFLSSIWSAEENHQVLNNNNNTNNNHNLSLSQASAERGVIRKQPSLPRQGSLTLPSPLCRKTVDEVWSEIHGGQQHSQQPQQNNNCGGTGGNNNNNNTNNNNNNNNNVQSTESVPRQPTFGEMTLEDFLVKAGIVREQCGMAAAMPFQASSLQHMQQYGMFPNSNPVMGPSFVGRPVMGIAGGSGGGGNVVAPSYQGGVGGAIGESSGYPAVVPPPGVCFGGRVVNGGVGGYAAVSNMGMVAPVSPVSPEGIGTGENSGGCGGGQFGMNMSVLRGRKRVLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENVQLKLALADLERRRKQQHLEEVNERVQTNNSQQSKKKLRSLRKTLSCPS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0541 443 Coils Coil 373 419 - -
Aed8g0541 443 MobiDBLite consensus disorder prediction 138 182 - -
Aed8g0541 443 MobiDBLite consensus disorder prediction 1 35 - -
Aed8g0541 443 CDD bZIP_plant_BZIP46 357 411 - -
Aed8g0541 443 MobiDBLite consensus disorder prediction 413 443 - -
Aed8g0541 443 SUPERFAMILY Leucine zipper domain 357 405 IPR046347 GO:0003700|GO:0006355
Aed8g0541 443 Gene3D - 355 405 - -
Aed8g0541 443 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 5 441 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Aed8g0541 443 MobiDBLite consensus disorder prediction 10 35 - -
Aed8g0541 443 MobiDBLite consensus disorder prediction 100 124 - -
Aed8g0541 443 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 5 441 IPR043452 GO:0003700|GO:0045893
Aed8g0541 443 SMART brlzneu 353 419 IPR004827 GO:0003700|GO:0006355
Aed8g0541 443 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 360 375 IPR004827 GO:0003700|GO:0006355
Aed8g0541 443 MobiDBLite consensus disorder prediction 137 182 - -
Aed8g0541 443 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 355 407 IPR004827 GO:0003700|GO:0006355
Aed8g0541 443 Pfam bZIP transcription factor 357 404 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0541 Aed-Chr8 4665011 4670853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0541 6 411 bZIP Transcription Factor Family AT2G36270 48.124 6.46e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed8g0541 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0541 K14432 - gmx:100790948 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0541 8 4665011 4670853 Aed8g0541 8 4665011 4670853 ECH
Aed2g1970 2 24258788 24266638 Aed8g0541 8 4665011 4670853 PCT