Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0529 ATGGCGGAAGAACACCGATGCGAAACTCCTGAAGGTCACCGACTCTGCGCCAACAACTGCGGCTTGTTCGGCAGCACCGCCACCAACAACCTCTGCACCAAATGCTACGGCGCGATCCGTTTGAAGGAGCAAGAAGAAGCGTCGACCAAATCCACCATCGAAACCGCGCTCTCCTCCTCCTCCTCCTCCGCGATGCCGTCGTTGTCCACGTCACCTCCGTCGTCAGCGGCGGTGGATGTCCTCATCGAATCTCTGCCTCCGCCGGTTGCGGTTGCGGTGGCGTCGAGTTCTATTATAACCGGTTCGGTTGCGCAACCGAATCGGTGTGCGTCGTGTCGGAAGCGCGTGGGATTGACCGGGTTCAAGTGCAGGTGCGGAGTGACGTTCTGCGGGGCCCACAGGTACCCGGAGAAGCACGCGTGCGGGTTCGACTTTAAGACGGTGGGCAGAGAGGAGATTGCACGCGCCAACCCTTTGATCAAAGCGGAGAAGCTGCAGAGGATTTGA 507 0.5976 MAEEHRCETPEGHRLCANNCGLFGSTATNNLCTKCYGAIRLKEQEEASTKSTIETALSSSSSSAMPSLSTSPPSSAAVDVLIESLPPPVAVAVASSSIITGSVAQPNRCASCRKRVGLTGFKCRCGVTFCGAHRYPEKHACGFDFKTVGREEIARANPLIKAEKLQRI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0529 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Aed8g0529 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 168 - -
Aed8g0529 168 SUPERFAMILY AN1-like Zinc finger 103 163 IPR035896 -
Aed8g0529 168 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Aed8g0529 168 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Aed8g0529 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 61 - -
Aed8g0529 168 Gene3D - 92 164 IPR035896 -
Aed8g0529 168 PANTHER BNAC06G14100D PROTEIN 1 168 - -
Aed8g0529 168 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Aed8g0529 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Aed8g0529 168 MobiDBLite consensus disorder prediction 49 74 - -
Aed8g0529 168 MobiDBLite consensus disorder prediction 50 74 - -
Aed8g0529 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Aed8g0529 168 Gene3D - 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0529 Aed-Chr8 4583622 4584128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0529 1 168 C2H2 Transcription Factor Family AT3G52800 55.294 9.12e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0529 - - gmx:100813749 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0529 8 4583622 4584128 Aed8g0529 8 4583622 4584128 ECH
Aed2g1964 2 24223656 24224165 Aed8g0529 8 4583622 4584128 PCT