Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0519 ATGAAGGTGGTCGCTGCGTATCTGCTCGCCGTCCTCGGTGGCAACAACACCCCCTCTGCCGCTGTCATCAAGGAAATCCTCGGCTCCGTTGGAGTAGAAGCAGATGATGAAAGGATTGAGCTTTTTTTGTCTGAAGTGAAGGGTAAGGATATAGTTGAGCTTATTGCTTCCGGTAGAGAAAAGCTGGCCTCAGTGCCTTCTGGTGGTGGTGGTGGTGTTGCTGTTGCCGCCTCTGCTGGTGGAGGTGGTGGCGCCGCCGCTCCTGCTGCCGAGGCAAAGAAAGAGGAGAAAGTGGAGGAGAAGGAGGAATCTGATGATGACATGGGTTTCAGTCTCTTCGATTAA 345 0.5333 MKVVAAYLLAVLGGNNTPSAAVIKEILGSVGVEADDERIELFLSEVKGKDIVELIASGREKLASVPSGGGGGVAVAASAGGGGGAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0519 114 Pfam 60s Acidic ribosomal protein 18 113 - -
Aed8g0519 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aed8g0519 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aed8g0519 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aed8g0519 114 Gene3D - 1 59 IPR038716 -
Aed8g0519 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
Aed8g0519 114 MobiDBLite consensus disorder prediction 78 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0519 Aed-Chr8 4477774 4479278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0519 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 68.421 3.62e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0519 K02943 - gmx:100499761 133.265