Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0516 ATGGCGGAGAAGCACTTACGGGAGCTCCTAAAGGAGGACCAAGAGCCCTTCCTTCTGAAACACTACATTTCGGAGCGTCGCAGCCAGCTCAAAAAAACACCTTCCCCTGATCCAAACACCACTTTATCACAACTCAAAAAGAAAAACTCCAACTTACCACTTAACAAGTGCTTCCAAAACGCCACAAAATCCCCACTACTCCTCCTGTCGCCGAAGAAGAGCCCCCTCATCAGACCCTCCAACGCCAAAACCGCGTCGCTCCTCCTCGAAGCTGCCCTCAGAATCCACAACAAAAACGTGAAGCCGAAGCCCAAACCAAACAGAGCCTTGGGCCTCTTCGGGTCGCTGTTGAAAAAACTCACGAGCCGCCGAAAGAGGGAAGCGTTAGAGGGTGTTGTTAATAAGGTTAAAGACAGCGACGAGGTGGTCGGGTTCACCTGTTCCAGCAGTGCTGTCTGGTCGGATAAATCGTTGGACTTGGAATCTTCTACTACCAACAGTGCCCACTCCTTTGACGAAGAGATTCAGTTTCTCAACAAACGCAAACAAAACCACGATCACGATCACGATCACGCCTTCTTCTGTGAAAGCCCTTTCCGTTTCTCTCTCCAACGGAGCCCCGACTACTCCGGCCGCTACACGCCGGAATTTTCTTCGCCGGCGGCTTCTCCATGTCGCCGCAAAACTGAGGACAAAGAAATCAACGGTGCTGATGGCGTCAACAAATTCCAATCAGGGGAAGAATCAGAGGAAGAAGATAAGGAACAGTGCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGACGACGACGACGATGGGCATGAAAATGACCATGGAGATGATGGCTTTGATTTGGAATGTAGCTATGCCAATGTACAAAGAACTAAGCAGCATCTATTAGACAGGCTTCGTAGATTTGAGAAACTTGCAGAGTTAGATCCTGTAGAACTTGAGAAAAGAATGCTGGACCAAGAAGACATTGAGTATGAAACATTTATCGAAGAGGATGATGATTATGAAGACGATGTTGTCGTCGTCGTCGACGGCGAAACAATCCCAGAAGAGCTTAAGAGGCTGGTTTATGATCTCATCAATGAGGAAGAAACAGAAGTTGAGTGTTCTGAAGAGAGGAATATGGTGATAAGAAGGGTTCTCAGGAGGCTAGAGTTGTGGAAAGAAGTGGAGTCAAACACTATTGATATGATGATAGACGAGGATTTCTCTAGAGAAGAAGGTAGGTGGAAGAAAAATGATGAGCACACAACAAGGGAGCTAGCTGTGGAAATTGAACTTGGTATCTTTTCCTTTCTAGTGGATGAACTTTCAGAGGAACTAGTGTGTTGA 1344 0.471 MAEKHLRELLKEDQEPFLLKHYISERRSQLKKTPSPDPNTTLSQLKKKNSNLPLNKCFQNATKSPLLLLSPKKSPLIRPSNAKTASLLLEAALRIHNKNVKPKPKPNRALGLFGSLLKKLTSRRKREALEGVVNKVKDSDEVVGFTCSSSAVWSDKSLDLESSTTNSAHSFDEEIQFLNKRKQNHDHDHDHAFFCESPFRFSLQRSPDYSGRYTPEFSSPAASPCRRKTEDKEINGADGVNKFQSGEESEEEDKEQCSPVSVLDPPFDDDDDGHENDHGDDGFDLECSYANVQRTKQHLLDRLRRFEKLAELDPVELEKRMLDQEDIEYETFIEEDDDYEDDVVVVVDGETIPEELKRLVYDLINEEETEVECSEERNMVIRRVLRRLELWKEVESNTIDMMIDEDFSREEGRWKKNDEHTTRELAVEIELGIFSFLVDELSEELVC 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0516 447 PANTHER OS04G0572500 PROTEIN 351 447 - -
Aed8g0516 447 PANTHER OS04G0572500 PROTEIN 1 342 - -
Aed8g0516 447 MobiDBLite consensus disorder prediction 211 282 - -
Aed8g0516 447 Coils Coil 289 309 - -
Aed8g0516 447 PANTHER - 351 447 - -
Aed8g0516 447 PANTHER - 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0516 Aed-Chr8 4427100 4431003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0516 3 446 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.535 2.77e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0516 - - gmx:100782984 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0516 8 4427100 4431003 Aed8g0516 8 4427100 4431003 ECH
Aed2g1950 2 24064581 24068452 Aed8g0516 8 4427100 4431003 PCT