Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0512 ATGGAAATGGAAGATCACCATCACCACCATCATCATCACCAACACCATCAACATCACTTTGGAACCACCATGAACGATCTAAGGCAAGTGCTCATCAATAATGGCCCGGGGCCGAGGTCACATAACACCTTCCCCTCCTCCTCCTCCTTGCCGCCACACCCCACGGCGGAGCTTTTTCCCGGCCACCACCACCGGAATCTCACTCAGCAACACTTCGAGGTTATGATGTTTGGTCGTGACATTATGCCACCTGGCCTTCACGACTTTGCTGCTGCTTCAACAACCCATGATTCTGCCGTTCCTACCAGTACCCTACCCACTCCACCGGTTACCAGCTGCGGCGGCTTCGATGCCGAGGGTGCAGGTTGCATCGGTGGAGACCCCTCCACCGGAAGATGGCCCAGACAAGAGACTCTCACTCTCCTTGAGATCAGATCTCGCCTAGACCCTAAATTCAAAGAGGCTAATCACAAAGGACCCTTATGGGATGAAGTTTCTAGGATGATGTGTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGTAGAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACAAAAGAAGGCAAGGCAGGAAGGCATGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACACAGTTTCAGTCCCAGAAACCAATGCTGCTGTTGGCACCATTCATCATTTTCAAGACAAGTCTCACTACAACAACAACAACAAGAATTGTGATAGCCTTAGCCTCACCACCTCCACTAACTTTGACACATCAACATCTGACAATGATGATGACGATGATAATATTAACAATGAGTCCTCCATGAATCAAAAGATGAGGAGAAAGAGGAAGAGTAGTGGGAGGAGTTGGAAGGTGAAGATAAAGGACTTCATTGACTCACAAATGAGGAAGCTGGTGGAGAAGCAAAAGGAGTGGTTGGATAAGCTTGTGAAGACACTTGAAGAGAAGGAGAAAGAGAGGATGGTGAGAGAGGAAGAGTGGAGGAATCAAGAGGCTAAGAGGTTAGAGAGGGAGCAAAAGTTTTGGGCCAAAGAGAGAGCATGGATTGAGGCTAGAGATTCTGCTTTGATGGAGGCTTTGCATAAGTTAACTGGAAGAGAGATTTTGAAGCCTGAAACTGATAATAATAATAATAATAATGTAATGGCAGCTGAAGTAGTTCAAAACCAGAATAATGAAGATGGGAGTGATGAAATCTTGAATATGTGCAAAGAGAAATGGAAAAGTATCAGTGATAACAACAAGAAGAGCAAGGATGAGAACTCTAGAATCTGCAGCTTTTACTTCAAGAACAATAATGAGGATCATTATCAACAATATCAAGGAAGTGGCTATTGTGATGATGATGATGATGTCAATGATCAAGGGAAAGAGATTAATATTGATGAGAGGAGGAGGCTTCAAACAAATAATAATAATGGTTCCTCTTCTTCACCTTCAAAATCCAATAATGTCGGAAATGTTGTTGTTGCTGCTCCTTCTTCTGATAGTTGCTTTCCCTTCTTGATGAGTGCTCATGAGAGTGGAAACATGTGGGAGAACTATGGCTTAAAGCTCAACAAAGAAAATCAAAACTAA 1629 0.4334 MEMEDHHHHHHHHQHHQHHFGTTMNDLRQVLINNGPGPRSHNTFPSSSSLPPHPTAELFPGHHHRNLTQQHFEVMMFGRDIMPPGLHDFAAASTTHDSAVPTSTLPTPPVTSCGGFDAEGAGCIGGDPSTGRWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRMMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFFRQLEALYGENSNTVSVPETNAAVGTIHHFQDKSHYNNNNKNCDSLSLTTSTNFDTSTSDNDDDDDNINNESSMNQKMRRKRKSSGRSWKVKIKDFIDSQMRKLVEKQKEWLDKLVKTLEEKEKERMVREEEWRNQEAKRLEREQKFWAKERAWIEARDSALMEALHKLTGREILKPETDNNNNNNVMAAEVVQNQNNEDGSDEILNMCKEKWKSISDNNKKSKDENSRICSFYFKNNNEDHYQQYQGSGYCDDDDDVNDQGKEINIDERRRLQTNNNNGSSSSPSKSNNVGNVVVAAPSSDSCFPFLMSAHESGNMWENYGLKLNKENQN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0512 542 MobiDBLite consensus disorder prediction 1 20 - -
Aed8g0512 542 CDD GT1 132 197 - -
Aed8g0512 542 MobiDBLite consensus disorder prediction 483 505 - -
Aed8g0512 542 MobiDBLite consensus disorder prediction 30 53 - -
Aed8g0512 542 Gene3D - 133 195 - -
Aed8g0512 542 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 47 412 - -
Aed8g0512 542 MobiDBLite consensus disorder prediction 480 505 - -
Aed8g0512 542 MobiDBLite consensus disorder prediction 266 297 - -
Aed8g0512 542 PANTHER - 47 412 - -
Aed8g0512 542 Pfam Myb/SANT-like DNA-binding domain 132 218 IPR044822 -
Aed8g0512 542 MobiDBLite consensus disorder prediction 30 61 - -
Aed8g0512 542 ProSiteProfiles Myb-like domain profile. 125 190 IPR001005 -
Aed8g0512 542 Coils Coil 316 343 - -
Aed8g0512 542 PANTHER - 417 529 - -
Aed8g0512 542 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 417 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0512 Aed-Chr8 4374892 4378758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0512 132 539 Trihelix Transcription Factor Family AT5G03680 44.153 8.84e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed8g0512 Myb_DNA-bind_4 9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0512 - - gmx:100799670 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0512 8 4374892 4378758 Aed8g0512 8 4374892 4378758 ECH
Aed2g1947 2 24035792 24039227 Aed8g0512 8 4374892 4378758 PCT