Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0504 ATGTCACCTGTGGCCTGTGGCCTGTTATTTTCTGCTGTTTTGCAATTTTCTCCTGTTATTGGCATAACTCTTTTGGGTCGGTTTGAGATTTTATCTTTGTCTGGATCATTCACAGTTGCTGACCACAGTGGCATGAAAAGCCGAACTGGTGGATTGAGTGTCTCACTTGCTGGCCCTGATGGTAGGGTGATAGGTGGTGGTGTTGCTGGACTTTTAACTGCTGCTGGCCCCATTCAGGTTGTTTTAGGAAGTTTCTTGCAAAATGGCATCAAGATCCAGAAGAGGAAGTATCATCAACGTGAGCAACGGACATTTGCCTCTCCTACTTCAGCTGGTCAAGAAATAGTGACAGCAGCAAGACCTATCTCCCAAGCAATTGCTGCTGATGGTGAAAGCTTTCTGATACCAATGTCACAGATACCAGATCAAAACCAGAGAGAATCTGTCACTGTCAGTGTTACTACAAGTGACAACAATCAGAACCTGGATGCTACACCTGATGCTGCTGCTACTTGGAATGGTTCTGAGGAATTTTCAGACCAGAGGACATCACCAGACATCAACATATCTCTGCGTGATGACTAG 585 0.453 MSPVACGLLFSAVLQFSPVIGITLLGRFEILSLSGSFTVADHSGMKSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQVVLGSFLQNGIKIQKRKYHQREQRTFASPTSAGQEIVTAARPISQAIAADGESFLIPMSQIPDQNQRESVTVSVTTSDNNQNLDATPDAAATWNGSEEFSDQRTSPDINISLRDD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0504 194 Pfam Plants and Prokaryotes Conserved (PCC) domain 23 85 IPR005175 -
Aed8g0504 194 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 23 192 IPR039605 GO:0003680
Aed8g0504 194 MobiDBLite consensus disorder prediction 144 186 - -
Aed8g0504 194 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 23 192 - -
Aed8g0504 194 CDD DUF296 22 85 IPR005175 -
Aed8g0504 194 ProSiteProfiles PPC domain profile profile. 1 111 IPR005175 -
Aed8g0504 194 SUPERFAMILY AF0104/ALDC/Ptd012-like 23 89 - -
Aed8g0504 194 MobiDBLite consensus disorder prediction 144 194 - -
Aed8g0504 194 Gene3D - 4 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0504 Aed-Chr8 4272707 4274066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0504 22 111 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.667 4.21e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0504 - - gmx:100779227 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0504 8 4272707 4274066 Aed8g0504 8 4272707 4274066 ECH