Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0503 ATGGGGTTGGGATCGGGATCGAGATTTAAGCTCCATTTGTTGAAGGGTGCCTTGATTGATACAGAGGATAAGTTTTTATTTCATTTGTTTCTCTCTGGTGATGGCCAAATAGCAAGTGGGGGGTTTGCAAACACAGCTGGTTGTGATTTTATACCGCATGTGCTGACTGTTCATACTGCAGAGGATGTTGCTGGAAAGATCTTGTCTATAGCCCAGAAGGGTACAAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCAAATGTCACCATACGCCAACCCGGTTCTTCTGGTGGCATATTGACTTATGAGGCATGCTCTCTTAGATCTCAATTCTCTGAGTAG 348 0.4425 MGLGSGSRFKLHLLKGALIDTEDKFLFHLFLSGDGQIASGGFANTAGCDFIPHVLTVHTAEDVAGKILSIAQKGTRGICILSANGAISNVTIRQPGSSGGILTYEACSLRSQFSE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0503 115 SUPERFAMILY AF0104/ALDC/Ptd012-like 51 104 - -
Aed8g0503 115 CDD DUF296 52 97 IPR005175 -
Aed8g0503 115 Pfam Plants and Prokaryotes Conserved (PCC) domain 52 109 IPR005175 -
Aed8g0503 115 Gene3D - 52 112 - -
Aed8g0503 115 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 42 106 - -
Aed8g0503 115 ProSiteProfiles PPC domain profile profile. 44 115 IPR005175 -
Aed8g0503 115 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 42 106 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0503 Aed-Chr8 4270904 4271709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0503 48 105 AT-hook Motif Nuclear Localized (AHL) Family AT4G00200 63.793 2.41e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0503 - - hbr:110660296 115.931