Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0498 ATGGCCTCCTGCGACGACGACGACGACTTCTCTCTCCTCCGTGACGACAACCACCACCACCTCCACCAACCCTACGCGCCACACCACCATTTCTCCCCCTCCTCCGTCACCGTCACCGTCGCCGCCCCCGTCCCTCCCAAGCCCGTCGCGGCCGACGAAGCCGAGGACTACGCCAACCCCTTCGATGACGACGACGGCGCTAGCGAGAAGCGCAAGGACCGCGACGAGATCGGCGAGGGATCCGCCTCCTACGGTTTCAACAAGAGATCTAAGGCTCCTCCGTCGAGCGCTGCCGCCGCCGCCGCGGCCGCCGAGTACCGCAAGGACCGGGAGGAGTGGAGCGACACCGCGATTGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACGCAGCTGAATCGGGGCAACCTGAGGGGAAGGGATTGGGAAGAGGTTGCGGCGGTGGTGAGCGAACGGTGCGATAATCAATCGAAGAGCGTGGAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATGAGCAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGTTCAAGCAATTGGAACAGATCGTCGGAAATTCTCTTCCGGCGAAGTTCTCCGACGAGGATAAAGCAGTTGTTTCTGCCGGAACTTCGCCCAGGCAATCGAAGAGATATGGAGTGGCAACACCCAGCACTGGAGGTCAAGCAAATAGCATGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGGGTAGTTCTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGAGAAGTTGCCATAGCATCCCGCCTTGGTGTGGAGGTGGCGATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCGACTCTAGAGAAGATTGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAGCCATACAATAGGCAGCGGGCAATCAGACATCTCGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAGTCCTCTTTTCTCAACTGATATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCAGTCCTCAAGGGTACTAACGTAGATGGTGTATATGACTGCAACTCACGAGACAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGTTCAAGAGGCGTCACCTCTATGGATATGTCAGCGCTGACATTCTGTGAGGAAAATGCAATTCCTGTTGTGGTTTTTAATCTACTGGAGCCGGGGAACATCTCAAAAGCCTTGTGTGGAGAACAAGTTGGCACACTGATTGACCAAACTGGAGCAATAAGCTAA 1479 0.522 MASCDDDDDFSLLRDDNHHHLHQPYAPHHHFSPSSVTVTVAAPVPPKPVAADEAEDYANPFDDDDGASEKRKDRDEIGEGSASYGFNKRSKAPPSSAAAAAAAAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCDNQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVVSAGTSPRQSKRYGVATPSTGGQANSMKSKALSNLRWRRVVLKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKIGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGSPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0498 492 Coils Coil 153 180 - -
Aed8g0498 492 MobiDBLite consensus disorder prediction 63 79 - -
Aed8g0498 492 CDD AAK_UMPK-PyrH-Ec 254 486 IPR015963 GO:0005737|GO:0006221|GO:0033862
Aed8g0498 492 Gene3D - 248 486 IPR036393 -
Aed8g0498 492 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 59 492 IPR011817 GO:0006221|GO:0009041
Aed8g0498 492 MobiDBLite consensus disorder prediction 223 244 - -
Aed8g0498 492 Pfam Myb/SANT-like DNA-binding domain 110 200 IPR044822 -
Aed8g0498 492 MobiDBLite consensus disorder prediction 1 95 - -
Aed8g0498 492 Pfam Amino acid kinase family 255 465 IPR001048 -
Aed8g0498 492 MobiDBLite consensus disorder prediction 7 22 - -
Aed8g0498 492 Gene3D - 113 176 - -
Aed8g0498 492 Hamap Uridylate kinase [pyrH]. 251 486 IPR015963 GO:0005737|GO:0006221|GO:0033862
Aed8g0498 492 SUPERFAMILY Carbamate kinase-like 252 485 IPR036393 -
Aed8g0498 492 PANTHER URIDYLATE KINASE 59 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0498 Aed-Chr8 4226985 4235371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0498 113 204 Trihelix Transcription Factor Family AT3G14180 39.362 5.58e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed8g0498 AA_kinase 3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0498 - - gmx:100805176 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0498 8 4226985 4235371 Aed8g0498 8 4226985 4235371 ECH