Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0496 ATGGAACCCAGTGGAATGTTCTCTGGGTTGGTAGGAGTTGAAAGCCCTTTACAACATCAACAACAACAAAACCCTCACCATTTGCAACAACACCATCCCCAAATGGTTCCATATTCCACACACCATGACACTGACCCACACCATCCACAGCACCTTAACCAATCAATCAAACAAGGGTACCCTCCTTTTTCATCCAACAAAACCAAACACCAACAACAACAACATTCCCCTCTCAGTGATGATGACGAGCCGGGTTTCCCTGGTGATGATGACCTCAAGAGGAAGGGCTCACCATGGCAGAGAATGAAGTGGACTGACACCATGGTGAGGCTGTTGATAATGGCGGTTTATTACATCGGCGATGAGGCTGGCTCTGATGGGAGCGATCATAAGAAGAAGGCCTCTGGTTTGCTGCAGAAGAAAGGGAAGTGGAAATCGGTTTCAAGGGCCATGATGGAGAAGGGGTTCTATGTCTCTCCTCAGCAGTGTGAGGATAAGTTCAATGACTTGAACAAGAGGTACAAGAGGGTGAATGATATTCTTGGCAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAATCTGTTGGACTCAATGGAATTGTCTCCAAAGATGAAAGATGAGGTTAAGAAGCTGCTCAATTCAAAGCATTTGTTCTTTAGGGAAATGTGTGCTTACCATAATAGTTTTGGCCATGGGAATAACAATAACAATGGTCCTCAGCAAGGAGAATCTGGGGGTGAAGTGTCTCAATCTCAGTCTCATGCTCAACCACATCAGCAGCTGCAACAACAGCAACAGCAACAACAACGATGTTTTCATTCATCAGAGGTGGGGAATTTGGGGGGTTTGAGGATGTTGAAAGTGGGAAATGGGGAAGATGATGATGATGAGGAGGAGGAGGAGGATGACTCTGAGGATGATTCGGACGAGGATGAGGATGATTCAGGAGAAGGTGGTTCAAGGGGTCATGTGGGGCATGGACATGAAGATATTGAGGATGAGAATGATGGAAGGTCCTCAATGAGGAATAAGAGGGCAAGGAAAGTAGGAGGAGGAGGAGGAGGGGTTTCTAATTCTCTGTCACCACAGATGATGCAGCAGCTGAGTGCTGAGGTGAGTGGCGTGTTCCAAGATGTGGCCAGGAGTGCTTGGGACAAAAAGCAATGGATGAGGAGCAGGATAATGCAGTTGGAGGAGCAGCAAATAAGCTATCAAACTCAAGCATTTGAGTTGGAGAAACAAAGGCTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCCAAGCTTGAAAATGAACGTAGGAGGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGCCAGAAGGAGCTTGAATTGATGACTCTTCAACACCAACAACAACAGCAGCATCAACAACAACAACAACAACATTCTTCCACCTAG 1440 0.4646 MEPSGMFSGLVGVESPLQHQQQQNPHHLQQHHPQMVPYSTHHDTDPHHPQHLNQSIKQGYPPFSSNKTKHQQQQHSPLSDDDEPGFPGDDDLKRKGSPWQRMKWTDTMVRLLIMAVYYIGDEAGSDGSDHKKKASGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDSMELSPKMKDEVKKLLNSKHLFFREMCAYHNSFGHGNNNNNGPQQGESGGEVSQSQSHAQPHQQLQQQQQQQQRCFHSSEVGNLGGLRMLKVGNGEDDDDEEEEEDDSEDDSDEDEDDSGEGGSRGHVGHGHEDIEDENDGRSSMRNKRARKVGGGGGGVSNSLSPQMMQQLSAEVSGVFQDVARSAWDKKQWMRSRIMQLEEQQISYQTQAFELEKQRLKWARFSSKKEREMERAKLENERRRLENERMVLLIRQKELELMTLQHQQQQQHQQQQQQHSST 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0496 479 Coils Coil 395 415 - -
Aed8g0496 479 Gene3D - 104 176 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 14 37 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 1 97 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 293 316 - -
Aed8g0496 479 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 7 470 - -
Aed8g0496 479 PANTHER F16F4.11 PROTEIN-RELATED 7 470 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 317 344 - -
Aed8g0496 479 Coils Coil 423 452 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 231 276 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 231 362 - -
Aed8g0496 479 MobiDBLite consensus disorder prediction 51 73 - -
Aed8g0496 479 Pfam Myb/SANT-like DNA-binding domain 101 225 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0496 Aed-Chr8 4216939 4218378 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed8g0496 Myb_DNA-bind_4 6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0496 - - gmx:100816661 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0496 8 4216939 4218378 Aed8g0496 8 4216939 4218378 ECH
Aed2g1927 2 23840431 23841771 Aed8g0496 8 4216939 4218378 PCT