Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0492 ATGAATGAAATGGGAGACAAGCACCAGCACCAGGACGACAGCAGCGATTTCACATCCGAGGACGAAGGCACCGAGGATTATCGCCGCGGCGGATACCACGCCGTCCGAATCGGCGACACCTTCAACGCCGCCCGCTATGTCGTTCAGAGCAAACTCGGATGGGGCCATTTCTCCACTGTCTGGCTCGCTTGGGACACCAAACATTCTAGGTATGTGGCTTTGAAAGTTCAGAAGAGTGCTCAGCACTACACCGAGGCGGCCTTGGATGAGATAACGATTTTGCAACAGATTGCAGAGGGAGACCCTGATGACAAGAAGTGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCTGGTCCCAACGGGCAGCATGTTTGCATGGTGTTCGAGTACCTCGGGGACAATCTTTTGACTCTTATTAAGTACTCCGATTACCGCGGGTTGCCGATTGCCATGGTTAAGGAGATTTGCTTTCATATTCTGGCTGGATTGGATTACTTGCACAAGCAGCTTTCTATCATACACACTGACTTGAAGCCTGAGAACATCTTGCTCTTGTCGATGATTGATCCGTTTAAGGATCCTAGGAAGTCTGGGGTGCCGCTTATTCTTCCTAATAGCAAAGATAAGATGGCCCTGGAGTCAGCAGGGGTGAAAGATGCAAAGACATTGAATGGGGATTTTGTTACGAATCATAAGAAAAAGATTAAGAGGAAAGCTAAGCAGGCAGCCCATGGATGTGTTGAGAAGGAAGCTTCTGAAGGAGTTGAGGGTAATCCCGAAACTTCTGGGGCTGTGGGGTCATCTCCAAATGCGAGTTCTGCAAGAGAACAGGCTTCAAGTTCTGCTGGAACTAGTAGGTTATCGGATGCTGATGGAACAAAGTTGAAAGAGCAGAGTAACAAAAGAGGAAGCCGCTCTATGAGACAGAAGCTGCTGGCATCAGTTGATCTCAAGTGCAAATTAGTGGACTTTGGTAATGCCTGCTGGACATATAAACAGTTTACTAACGATATCCAGACAAGACAATATCGATGCCCGGAGGTGATCCTTGGGTCAAAATATTCTACATCTGCGGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTTTTATTTGATCCTCACAGTGGTGACAACTTTGACAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGTGGCCGTTATTCCCGTGATTTTTTTAATAGATATGGAGACTTGAGGCACATTCGGCGGTTGCGATTCTGGCCCTTGAATAAAGTCCTCGTGGAGAAATATGACTTCAGTGAAAAAGATGCAAGTGATATGACAGAGTTTTTGGTTCCTATCCTTGACTTTGTTCCCGAGAAGCGGCCAACAGCTGGTCAGTGCCTTCTCCATCCATGGATGAATGCTGGTCCACGCCTTTTGGAACCATCATCCGTGCCTTCTAATCACAACCCTGCTGCTGAAACTACTGCTGCTACTTCGGATCAGAAAAAAAGGGACAAAGACGAGAGGGAGGCCATGGAGGCAGGAATGGGAAATATTGTTATTAATTCAGATTCTAAACTACTAATGCATTCTTCTCCATCAAAGAAACTCTTCCAAGGCAGCAGCCAAAAGTAG 1659 0.4653 MNEMGDKHQHQDDSSDFTSEDEGTEDYRRGGYHAVRIGDTFNAARYVVQSKLGWGHFSTVWLAWDTKHSRYVALKVQKSAQHYTEAALDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPIAMVKEICFHILAGLDYLHKQLSIIHTDLKPENILLLSMIDPFKDPRKSGVPLILPNSKDKMALESAGVKDAKTLNGDFVTNHKKKIKRKAKQAAHGCVEKEASEGVEGNPETSGAVGSSPNASSAREQASSSAGTSRLSDADGTKLKEQSNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYDFSEKDASDMTEFLVPILDFVPEKRPTAGQCLLHPWMNAGPRLLEPSSVPSNHNPAAETTAATSDQKKRDKDEREAMEAGMGNIVINSDSKLLMHSSPSKKLFQGSSQK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0492 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Aed8g0492 552 Gene3D Phosphorylase Kinase; domain 1 22 128 - -
Aed8g0492 552 MobiDBLite consensus disorder prediction 486 533 - -
Aed8g0492 552 PANTHER SERINE KINASE-LIKE PROTEIN 13 547 - -
Aed8g0492 552 MobiDBLite consensus disorder prediction 262 289 - -
Aed8g0492 552 Gene3D Transferase(Phosphotransferase) domain 1 129 481 - -
Aed8g0492 552 CDD STKc_SRPK 35 480 - -
Aed8g0492 552 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 547 - -
Aed8g0492 552 MobiDBLite consensus disorder prediction 488 505 - -
Aed8g0492 552 ProSitePatterns Protein kinases ATP-binding region signature. 52 75 IPR017441 GO:0005524
Aed8g0492 552 MobiDBLite consensus disorder prediction 242 256 - -
Aed8g0492 552 SMART serkin_6 46 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0492 552 SUPERFAMILY Protein kinase-like (PK-like) 42 494 IPR011009 -
Aed8g0492 552 MobiDBLite consensus disorder prediction 240 308 - -
Aed8g0492 552 MobiDBLite consensus disorder prediction 1 26 - -
Aed8g0492 552 MobiDBLite consensus disorder prediction 506 521 - -
Aed8g0492 552 ProSiteProfiles Protein kinase domain profile. 46 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0492 552 MobiDBLite consensus disorder prediction 291 305 - -
Aed8g0492 552 Pfam Protein kinase domain 313 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0492 552 Pfam Protein kinase domain 46 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0492 Aed-Chr8 4178188 4185033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0492 13 534 EF-hand Containing Proteins AT5G22840 69.333 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Aed8g0492 Pkinase 1.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0492 K08832 - gmx:100803070 1027.31