Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0480 ATGGACACAATGTTGGTGCCTCCATGGCTTGAGCCACTCCTAAACACATCCTTTTTCAATGTCTGTCAGATTCACAGACATTTTGGAAGGAGCGAATGTTGTAACATGTTTTGTCTGGACTGTAATGAGAATGCGTTTTGCTTCTATTGTCGTTCCACAACACACAAGGATCACCAAGTCATTCAGATAAGAAGATCTTCTTATCACGATGTAGTGAGGGTGGAGGAAATTGAGAAAGTGTTGGACATTGGTGGAGTTCAAACATATGTGATCAACAGTGCCAGAGTTTTGTTTCTGAATGAGAGGCCTCAACCAAAGTCTGGAAAAGTAGTAGTATCTCACATTTGTGAGATTTGCAGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGCTGTAAGCTTGTAGGAATAAAGAGAAGAAATGGGGATGATGCAAGTTTTGCTTTGGATGCTAAAAATGAGGCACCAACAATGGAAGATATGTCAAAAAGATCGTTTTTTTCTTCAAGACAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTATCCGGCCACGCCTTCTCCACCTTCTTCAATCGCAAGGAGAAGAAAAGGGATTCCTCATAGGGCACCTTTTGGCTCCTAA 636 0.4198 MDTMLVPPWLEPLLNTSFFNVCQIHRHFGRSECCNMFCLDCNENAFCFYCRSTTHKDHQVIQIRRSSYHDVVRVEEIEKVLDIGGVQTYVINSARVLFLNERPQPKSGKVVVSHICEICRRSLLDPFRFCSLGCKLVGIKRRNGDDASFALDAKNEAPTMEDMSKRSFFSSRQEEELREGSQQDMYPATPSPPSSIARRRKGIPHRAPFGS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0480 211 Pfam PLATZ transcription factor 64 136 IPR006734 -
Aed8g0480 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 210 - -
Aed8g0480 211 MobiDBLite consensus disorder prediction 167 181 - -
Aed8g0480 211 MobiDBLite consensus disorder prediction 161 211 - -
Aed8g0480 211 CDD Bbox2 21 63 - -
Aed8g0480 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0480 Aed-Chr8 4089658 4091697 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed8g0480 PLATZ 5.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0480 - - gmx:100809455 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1911 2 23740802 23743077 Aed8g0480 8 4089658 4091697 PCT