Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0460 ATGGCGGTTCCAGGGAGGCGCAACGGCATGAACGACGACGAAGAGGAGTTAGACGACAACGCTCTTTTCGAAGAACAAGCTTTCGTCGAAGACGACACCGATACCCCTCCTCACCTCCGCGACCTCGCCGCCGCAGCTCAGCTCGGCGACGTCCACGCCCTCCGTCTCGCTCTTGATAACTTGACTGGTAGTATTGACGAGCCAGTGGAGGATGGGGATAGTGCTCTTCATTTGACATGTTTATATGGCCATTTGGCTTGCGTCCAGCTGCTACTAGAAAGAGGAGCAGACATTGAGGCCAAGGATGAAGAGGGTGCTATTCCTTTGCATGATGCTTGTGCAGGAGGATTTACTGAGATAGTCCAACTGCTGCTTAGCAGAGCTAATGATGCAGACCATATAAAAAGAATGCTAGAATCAGTTGATTCTGAGGGTGATACTCCTCTTCATCACGCTGCAAGAGGTGAGCATGTTGATGCAATTAGGTTGTTGCTGTCTAATGGTGCGTCTCCCACAAAGGCAAACTTATATGGAAAGGCCCCAGCAGATTTACCTGAACAGGACACAGATGCTTGGAGGCTGCTTGAAGCTGCCGCCCTTGCCATGGCATGCCAATAG 618 0.5113 MAVPGRRNGMNDDEEELDDNALFEEQAFVEDDTDTPPHLRDLAAAAQLGDVHALRLALDNLTGSIDEPVEDGDSALHLTCLYGHLACVQLLLERGADIEAKDEEGAIPLHDACAGGFTEIVQLLLSRANDADHIKRMLESVDSEGDTPLHHAARGEHVDAIRLLLSNGASPTKANLYGKAPADLPEQDTDAWRLLEAAALAMACQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0460 205 Gene3D - 36 201 IPR036770 -
Aed8g0460 205 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Aed8g0460 205 ProSiteProfiles Ankyrin repeat region circular profile. 144 170 - -
Aed8g0460 205 SMART ANK_2a 104 133 IPR002110 GO:0005515
Aed8g0460 205 SMART ANK_2a 71 100 IPR002110 GO:0005515
Aed8g0460 205 SMART ANK_2a 144 173 IPR002110 GO:0005515
Aed8g0460 205 ProSiteProfiles Ankyrin repeat profile. 144 176 IPR002110 GO:0005515
Aed8g0460 205 SUPERFAMILY Ankyrin repeat 42 184 IPR036770 -
Aed8g0460 205 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Aed8g0460 205 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Aed8g0460 205 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 205 - -
Aed8g0460 205 Pfam Ankyrin repeats (3 copies) 104 173 IPR002110 GO:0005515
Aed8g0460 205 Pfam Ankyrin repeats (3 copies) 42 102 IPR002110 GO:0005515
Aed8g0460 205 ProSiteProfiles Ankyrin repeat region circular profile. 104 132 - -
Aed8g0460 205 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0460 66 187 Ion Channels AT2G26650 30.137 1.47e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0460 - - gmx:100527544 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0460 8 3884378 3886803 Aed8g0460 8 3884378 3886803 ECH