Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0452 ATGCAAGGAGAACATTTGCGTAAAGGGACTTGGCTTCAAGAGGAAGATGAACAATTGACAAGCTTTGTGACCCGTCTTGGAGAAAGAAGGTGGGATTCCCTTGCCAAAGTAGCTGGACTCAAGAGAAGTGGTAAAAGTTGTAGGTTAAGATGGATGAACTATCTTCGTCCAAATCTCAAGCATGGTCCTTTTAGTGTTGAAGAAGAGCATCTTATTGTTCAGCTTCAGCAGCAATTGGGTAACAAGTGGGCAAAGATTGCTCTGAAACTTCCAGGAAGAACTGACAATGAAATCAAGAATTACTGGAGAACCCATTTAAGAAAAAGAGCTCGAGTTCAACAACAAGGTGCAATTAATGTGTTGGCTATTCATTCTCTCTGTAGACATTACAAATTAGAAATATCAACACAAGAGTTGAGCCAGAAAAGCAGTGATTTGGTTTGCAAGGATTACAACAACACAGGAAACGTTTGTTGTGAAGATAGTGAGTGGGAGACAAAGGATAGTAGTAGCTCCATAGACACTTTACCTGTTTCAGATTGGGAATTGAGAAACTCACCCTATGAAACTAGGATATTGGATTGGATAGCAGAATTGCAAAATGGATATGGTGAGAAAGAACCAGAACAAGATTGTAGTAGCACAGGAACATTATTCAACTATGCAGAGGGATGTGACTCATGGAATAATTATTCAGGTTCATTATGGGATATGAACTAA 720 0.3931 MQGEHLRKGTWLQEEDEQLTSFVTRLGERRWDSLAKVAGLKRSGKSCRLRWMNYLRPNLKHGPFSVEEEHLIVQLQQQLGNKWAKIALKLPGRTDNEIKNYWRTHLRKRARVQQQGAINVLAIHSLCRHYKLEISTQELSQKSSDLVCKDYNNTGNVCCEDSEWETKDSSSSIDTLPVSDWELRNSPYETRILDWIAELQNGYGEKEPEQDCSSTGTLFNYAEGCDSWNNYSGSLWDMN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0452 239 PANTHER MYB TRANSCRIPTION FACTOR 3 239 - -
Aed8g0452 239 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Aed8g0452 239 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Aed8g0452 239 Gene3D - 63 125 - -
Aed8g0452 239 CDD SANT 63 106 IPR001005 -
Aed8g0452 239 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Aed8g0452 239 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Aed8g0452 239 Gene3D - 8 60 - -
Aed8g0452 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 239 - -
Aed8g0452 239 CDD SANT 10 55 IPR001005 -
Aed8g0452 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Aed8g0452 239 SMART sant 60 108 IPR001005 -
Aed8g0452 239 SMART sant 7 57 IPR001005 -
Aed8g0452 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Aed8g0452 239 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0452 Aed-Chr8 3831310 3833127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0452 4 115 MYB Transcription Factor Family AT5G59780 58.929 2.09e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed8g0452 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0452 K09422 - gmx:100783472 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0452 8 3831310 3833127 Aed8g0452 8 3831310 3833127 ECH