Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0446 ATGGCAGCAGCAGAAAATGGCAACAACACTTTCTGCTTGAGTAGTGTTAACAACAACAATGGGAACGGTGTTGCTAACTACGATCCCTTGAACTGGGGTGCTGCGGCGGAGGCTATGGCGGGGAGCCACCTCAACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAGGCCCATCGTCAAGCTCGGCGGTCAGACCCTCACGATCTCGCAGGTTGCCGCGATCGCCTCCCACGATCAAGGGATCAAGGTGGAGTTGGCTGAGTCCGCCAGGGCCGGCGTCAAGGCCAGCAGTGACTGGGTCATGGACAGCATGGACAAGGGCACTGACAGCTACGGCGTCACCACCGGCTTCGGCGCCACCTCCCACCGCAGAACCAAACAGGGCGGTGCCTTGCAGAAGGAGCTAATTAGGTTTTTGAATGCTGGAATATTTGGCAATGGTACAGAGTCGAACTGCACCCTACCCCACACAGCAACAAGAGCAGCAATGCTAGTGAGAATCAACACACTCCTCCAAGGCTACTCAGGCATAAGGTTTGAAATCCTGGAGGCAATCACAAAGCTTCTGAACAGCAACATCACACCATGCCTCCCCCTCAGAGGAACAATCACAGCATCAGGTGACCTTGTTCCTCTGTCTTACATTGCCGGCTTGCTAACCGGCAGACCGAACTCCAAGGCCGTTGGACCCTCAGGGGAGATTCTGAATGCCAAGGAAGCCTTCGAATCAGCCAACATCAACGGCTCTGAGTTCTTTGAGTTGCAGCCTAAGGAAGGCCTTGCACTTGTGAATGGCACTGCTGTTGGGTCCGGCTTGGCTTCAATTGTTCTTTTCGAAGCAAACATCCTTGCTGTTCTGTCCGAGGTTATTTCAGCTGTTTTTGCTGAAGTTATGCAAGGAAAGCCTGAATTCACTGATTACTTGACTCACAAGCTAAAGCACCACCCTGGTCAGATTGAAGCTGCTGCTATTATGGAACACATTTTGGATGGAAGCTCTTACATGAAAGCTGCTAAGAAGTTGCATGAGATTGACCCTTTGCAGAAGCCTAAGCAAGACCGTTATGCTCTTAGGACTTCACCACAATGGCTTGGCCCTCAGATTGAAGTGATTAGATTCTCCACCAAGTCAATTGAGAGGGAGATTAACTCTGTCAATGACAACCCTTTGATTGATGTGTCTAGGAACAAGGCACTTCATGGTGGTAACTTCCAAGGAACGCCAATTGGAGTGTCCATGGACAACACACGTTTGGCCATTGCTTCTATTGGGAAACTCATGTTTGCTCAATTCTCGGAGCTTGTCAATGACTACTACAACAACGGCTTGCCCTCCAATCTCACCGCCAGCAGGAACCCCAGCTTGGATTATGGATTCAAGGGATCAGAGATCGCGATGGCGTCTTATTGTTCTGAGCTGCAATACTTGGCGAACCCGGTGACAAGCCATGTGCAAAGCGCGGAGCAGCACAACCAGGATGTGAACTCGTTGGGTTTGATTTCTTCACGGAAGACAAATGAGGCTGTTGAGATCCTCAAGCTAATGTCATCCACTTTCCTCGTTGCGCTTTGCCAGGCCATTGACCTGAGACATTTGGAGGAGAATCTGAAGAACACGGTGAAGAACGTGGTGAGCCAAGTTGCTAAGAGGACTCTCACCACAGGTGTGAATGGAGAGCTTCACCCTTCGAGATTCTGTGAGAAGGACTTGCTTAAGGTTGTTGATAGGGAGTACACATTTGCATACATTGATGACCCCTGCAGTGGAACATACCCTTTGATGCAGAAGCTGAGGCAAGTGCTTGTGGATTATGCTTTGGCCAATGGTGAGAATGAGAAGAACACAAACACTTCAATCTTCCAAAAGATTGCAACTTTTGAGGAGGAGTTGAAGACCCTCTTGCCCAAGGAAGTGGAAGGTGCAAGGCTTGCATATGAGAATGACCAGTGTGCAATCCCCAACAAGATCAAGGAATGCAGGTCTTACCCCTTGTACAAGTTTGTGAGAGAGGAGTTGGGGACAGCATTGCTGAGTGGTGAAAAGGTTGTGTCACCGGGTGAAGAGTGTGACAAAGTGTTCACTGCTTTGTGCCAAGGTAGAATCATTGATCCACTCTTGGAATGCCTTGGAGAGTGGAATGGTGCACCTCTTCCAATTTCTTAG 2163 0.4984 MAAAENGNNTFCLSSVNNNNGNGVANYDPLNWGAAAEAMAGSHLNEVKRMVEEYRRPIVKLGGQTLTISQVAAIASHDQGIKVELAESARAGVKASSDWVMDSMDKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFESANINGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVISAVFAEVMQGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGSEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAVEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNTNTSIFQKIATFEEELKTLLPKEVEGARLAYENDQCAIPNKIKECRSYPLYKFVREELGTALLSGEKVVSPGEECDKVFTALCQGRIIDPLLECLGEWNGAPLPIS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0446 720 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 28 709 IPR005922 GO:0005737|GO:0006559|GO:0016841
Aed8g0446 720 Pfam Aromatic amino acid lyase 66 547 IPR001106 -
Aed8g0446 720 Gene3D Fumarase/aspartase (Central domain) 267 715 - -
Aed8g0446 720 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 719 - -
Aed8g0446 720 PANTHER HISTIDINE AMMONIA-LYASE 17 719 IPR001106 -
Aed8g0446 720 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 201 217 IPR022313 GO:0016841
Aed8g0446 720 Gene3D - 533 654 IPR023144 -
Aed8g0446 720 Gene3D - 19 266 IPR024083 -
Aed8g0446 720 CDD PAL-HAL 64 530 IPR001106 -
Aed8g0446 720 SUPERFAMILY L-aspartase-like 28 719 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0446 Aed-Chr8 3734422 3738840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0446 28 719 Monolignol Biosynthesis Gene Families AT2G37040 83.382 0.0 1222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0446 K10775 - gmx:100803857 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0446 8 3734422 3738840 Aed1g2502 1 20736294 20739815 ECH
Aed8g0446 8 3734422 3738840 Aed8g0446 8 3734422 3738840 ECH