Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0443 ATGAGGAACCATGCTTCCTGCAGGCTCCCTCTTCTCTTCTTGATTATCCCTTTCATCTCGCCGCCGCCCCCGTTGGTTCAATGCGCCGATAGCAACTTCGCACCCTCCTTCTACTCCGAAGAAATCTACAAGGAGCTCCAAAACCTCGCTTCCCTGTTAAACAAGGACATTGAAGCAGGGGATTTCAGAGATAGAATATGCACTGTGTCTGAAATAAGGTACTACTTCCATGGTTTCTTGGAACATGCTGCATCGAGTGCGAATTACGTAAAGCCTAACAAGAATTGCAATTTGACATCGTGGGTTTCTGGTTGTGAACCTGGATGGAGTTGTAGTGCTGAGAAAAATGTTGATCTCAAAAAGGATGTAAAGGAAATTCCTTTTAGAACTGGCAACTGTCAGCCTTGTTGTGAAGGGTTTTTCTGCCCTCAAGGATTGACTTGCATGATACCATGCTCCAAGTTGAGTTCCTGTAATCCAAACACAGCAACCCAAAATATGCATGCTTATGGCGCTTTGCTTATTGTTGCATTGAGTACTCTCTTGATCTTCATTTACAATTGTTCTGATCAAGTTCTAGTTACTAGAGAAAGGAGAAAGGCTAAGTCAAGAGAATCTGCTGCTAGACAAGTAAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAAATAGCAAAAGATATTGCTAAGAAAGGTAAGGGAGGATTGCAAGAACAATTAACTCGCACCTTTTCGCGCAAAAAATCAGCAAAGCAACCAGCAGTGCCTCCAAATTCTTCAACCATGTACGAGCATCCATCTGCAGCAGCAGCAGTAGCAACAGCTTCAAAAGTGCAAAACAAGGAACCTACCAACCTCACTAAAATGTTGAATTCCTTTGAGGATGATCCAAATAGCAATGAAGGATTCAATCTACAAATTGGAGACAAAAACATTAAAAAGCAGATGCCAAAGGGAAAGAACCTACACACACAAAGCCAGATTTTGAGGTATGCTTATGGACAGATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAAGAACTTGACTTTCTCAGGAGTTATTTCAATGGCCACTGAAGGCGAGGTTCGAACAAGGCCTGTGATTGAGGTGGCTTTTAAGGACTTAACTCTTACTTTGAAAGGTAAAAGAAAACACATAATGAGATGTGTGAGTGGAAAACTCATGCCAGGTCGAGTTTCGGCTGTGATGGGTCCCTCAGGAGCCGGAAAAACTACATTTCTCTCTGCCTTGGCAGGCAAGGCAAGAGGATGCACTATGTCAGGCTCAATTCTGATCAACGGAAAACCTGAATCCATTCATTGTTATCAAAAAATTGTCGGTTATGTGCCACAAGATGATATTGTGCATGGGAACTTGTCAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGATGATATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTAGGACTCCAGGCAGTGAGGGATTCCCTTGTTGGAACAGTAGAGAAGAGAGGTATATCTGGAGGGCAACGAAAGCGTGTAAATGTAGGGATGGAGATGGTTATGGAGCCTTCATTGTTAATCTTAGATGAACCTACAACTGGCCTAGACAGTGCATCTTCCACTTTACTTCTTAAAGCACTTCGCCGTGAAGCACTTGAAGGGGTAAATATCTGCATGGTACTTCATCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATCTTTCTAGCCAAAGGTGGCCTCACTGCATATCATGGTCCAGTTAAAAAAGTAGAAGAATACTTTGCTGGCATTGGAATCACAGTACCTGATCGTGTGAATCCCCCAGACCATTTCATTGATATTTTGGAAGGTTTAGTGAAACCAAATGGACCTGTGACCTATCAGCAACTTCCTGTGAGATGGATGTTACATAATAGTTACCCAGTGCCACCAGATATGCTTCATTTTGCTGATCAAATTGCTGCCTCCTCCTCCACCTCCACCACACCTGTAAATGATGTAACAAAGGGTGCAGAGGACATTGTTGATCAATCCTTTGCTGGAGAGTTTTGGGAGGATATGAAGAATAATGTTCAGATGCAACGAGATCATATAGAGGCAACCTTCTTACAGACTAAGGACTTGTCTAATCGAAGAACTCCCGGTGTAGCTCGACAGTATAGATATTACCTTGGCCGGATTTGTAAGCAGACACTACGAGAAGGACAATCACAAGCAGTTGACTACCTCCTCTTATTAGTTGCTGGTGCTATATTAGGAACTCTTACTAAAGTAAATGACGAAACATTTGGGTCCCTTGGATATACCTATACTGTTATTGCTGTCTCTTTACTTTGCAAGATTGCAGCTCTGAGATCATTTTCTCTTGATAAATTGCAATACTGGAGGGAGAGTGCATCTGGAATTAGCAGTCTGGCTCATTTTATGGCAAAAGATACAATTGATCTTTTCAATACACTCATCAAACCTGTAGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCGAGCTTCGCAAGTAATTATGCGGTTTTGGTCTGCCTTGTGTACTCTGTAACTGGCATGGCTTATGCAATAGCAATTTATTTTGCGCCTGCTCCGGCACAGCTGTGGTCAGTGCTCCTCCCAGTTGTTATGACTCTCATTGCAAACCAGAAAAGAGATACTCTCTTTATGAAGATCCTCATAAAGTTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGTTCACTGATGAATAGTGGCTATAATGTTAGCGATTGGCCTCTTTGTCTGCTTGTCCTCATTATTTACGGACATGAGATGGATCAGGAAGAATATTTGCAGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGGTGGATGAATCATATGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAAGCTAGAAATGATCATGCTTCCCTGGATGGTAGTTTGGATTCTCATACAACTTTGAATGGCAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTGGATGATGTTGAAATCGATTTTGGATTTTCTGACAAATTTGAGGAGGTACTAGGCTCTGGTCCTTTTGAAGGTTCACTCTTGCAAAATTCAAGTTCTGAAAGTCATTCTTCCAGATTAAGCGAGAGTAGCATTGTTGGTGGAGTATTAGAATCAACAAAAGTACCTATTGCACAATCTGAATGCAAAAATAATTCTCTAGATGAGACAGTAACATATGAATCACATAATGCCTTCAGGAACAATCCAAGTCAACCATCAAAAGTAAGTTGCAGGTATAACATTTCACTCGATATACAACATCTGCAAGAGTTGGATAACAATTGTCATTTAGCTGGTGGTATATTGACTTGTAAGAAGGAAAAGGGCCCTGTTGTAAAAGGCCAACCTGCTGCACTAAAAGAGAAGAGATTCCGAAAGCCTACTCAGAGGTACATTGAAGAATTTTCAAATTCAAGGTCAAAGGAAAAGACACCAACTGCTGGTACAAAAACTAAACATTTAAGTGACTCATCATGTGATGTACTTCGTATAAGAATTAAAGCATTGAAAAAGAGTCCAAGCGAGAAATCTAGTATTGAAAATAGTGATGTGATGCTTCCTGAGTTGCAAGTTCGCAAAGGGCGTCCGAAGAAAGAGAAACTTGAGTATGACGAGTCATTTCCCTCAGAATCCGAGGATGGATATTCAACATCAAAAAGATCTAGAAGGAAAGATCGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAATTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGATGGACTGACATTAAGAGGTTTCTGTTTTCCTCTTCAAGCTACCGAACTCCCATAGATCTCAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGCACAGAAAAGCATCACAGAGGCTGAGCAAAATGACGAGCTCGCCCTGCGTCCCTTGCCAATTAATGTGGTGCATCGTGTGCAAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAGTTGCGTGCTAGCCAAGCTGGCTCTTCTGTCACTGCTAAAGATTCTCCTCCAGTTAGTCTTAGCAAAAGAAATGTACGTAGGAAGTTTACTTAG 4191 0.4154 MRNHASCRLPLLFLIIPFISPPPPLVQCADSNFAPSFYSEEIYKELQNLASLLNKDIEAGDFRDRICTVSEIRYYFHGFLEHAASSANYVKPNKNCNLTSWVSGCEPGWSCSAEKNVDLKKDVKEIPFRTGNCQPCCEGFFCPQGLTCMIPCSKLSSCNPNTATQNMHAYGALLIVALSTLLIFIYNCSDQVLVTRERRKAKSRESAARQVRETVQARERWKIAKDIAKKGKGGLQEQLTRTFSRKKSAKQPAVPPNSSTMYEHPSAAAAVATASKVQNKEPTNLTKMLNSFEDDPNSNEGFNLQIGDKNIKKQMPKGKNLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKRKHIMRCVSGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMSGSILINGKPESIHCYQKIVGYVPQDDIVHGNLSVEENLRFSARCRLSDDMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGITVPDRVNPPDHFIDILEGLVKPNGPVTYQQLPVRWMLHNSYPVPPDMLHFADQIAASSSTSTTPVNDVTKGAEDIVDQSFAGEFWEDMKNNVQMQRDHIEATFLQTKDLSNRRTPGVARQYRYYLGRICKQTLREGQSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESASGISSLAHFMAKDTIDLFNTLIKPVVYLSMFYFFSNPRSSFASNYAVLVCLVYSVTGMAYAIAIYFAPAPAQLWSVLLPVVMTLIANQKRDTLFMKILIKLCYPNWALEAFIIANAESSLMNSGYNVSDWPLCLLVLIIYGHEMDQEEYLQKCSNMKCQRVQVDESYVPALQDEVMEVEHLLAEARNDHASLDGSLDSHTTLNGKDDLELEVLDGLLDDVEIDFGFSDKFEEVLGSGPFEGSLLQNSSSESHSSRLSESSIVGGVLESTKVPIAQSECKNNSLDETVTYESHNAFRNNPSQPSKVSCRYNISLDIQHLQELDNNCHLAGGILTCKKEKGPVVKGQPAALKEKRFRKPTQRYIEEFSNSRSKEKTPTAGTKTKHLSDSSCDVLRIRIKALKKSPSEKSSIENSDVMLPELQVRKGRPKKEKLEYDESFPSESEDGYSTSKRSRRKDRRKHQKMWTLPEVLNLVEGISEYGVGRWTDIKRFLFSSSSYRTPIDLRDKWRNLLRASSAQKSITEAEQNDELALRPLPINVVHRVQELAKIHPYPRQRGSKKLRASQAGSSVTAKDSPPVSLSKRNVRRKFT 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0443 1396 SMART AAA_5 396 588 IPR003593 -
Aed8g0443 1396 MobiDBLite consensus disorder prediction 1169 1187 - -
Aed8g0443 1396 MobiDBLite consensus disorder prediction 1169 1192 - -
Aed8g0443 1396 MobiDBLite consensus disorder prediction 1228 1245 - -
Aed8g0443 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 593 IPR027417 -
Aed8g0443 1396 Coils Coil 976 996 - -
Aed8g0443 1396 MobiDBLite consensus disorder prediction 1356 1396 - -
Aed8g0443 1396 Gene3D - 1256 1369 - -
Aed8g0443 1396 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 153 - -
Aed8g0443 1396 Gene3D - 360 606 IPR027417 -
Aed8g0443 1396 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 151 952 - -
Aed8g0443 1396 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 151 952 - -
Aed8g0443 1396 MobiDBLite consensus disorder prediction 1228 1267 - -
Aed8g0443 1396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1262 1322 IPR017930 -
Aed8g0443 1396 Pfam Myb-like DNA-binding domain 1270 1318 IPR001005 -
Aed8g0443 1396 CDD ABCG_EPDR 368 594 - -
Aed8g0443 1396 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 47 153 - -
Aed8g0443 1396 SMART sant 1267 1320 IPR001005 -
Aed8g0443 1396 CDD SANT_TRF 1269 1319 - -
Aed8g0443 1396 ProSiteProfiles Myb-like domain profile. 1263 1318 IPR001005 -
Aed8g0443 1396 Pfam ABC-2 type transporter 568 952 IPR043926 GO:0140359
Aed8g0443 1396 MobiDBLite consensus disorder prediction 1367 1384 - -
Aed8g0443 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 370 611 IPR003439 GO:0005524
Aed8g0443 1396 SUPERFAMILY Homeodomain-like 1270 1338 IPR009057 -
Aed8g0443 1396 ProSitePatterns ABC transporters family signature. 511 525 IPR017871 GO:0005524
Aed8g0443 1396 Pfam ABC transporter 390 538 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0443 Aed-Chr8 3684097 3699606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0443 397 590 Calmodulin-binding Proteins AT2G36910 28.713 4.58e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0443 - - gmx:100812387 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0443 8 3684097 3699606 Aed8g0443 8 3684097 3699606 ECH