Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0442 ATGAAGTGTTTTACATTCTACTTTGGAGAGAAGAAAGATGGTCCTAAGAGCATGCAATCCTTATCGGGTCAGTCCAACAGTTCTACTTATGTTGAGGCTGAGATGAGAAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACAACAGCACAGACTCACTCAGGAGAACTGCATTTCCCAGTTTGTCCCAAAAACCAAGCAACCTCAGAGTATTTACTGTATCTGAACTGAAAACTGCTACAAAGAGTTTTAGTCGCTCTGTAATGCTTGGAGAAGGTGGATTTGGATGTGTCTACAAGGGGTTGATCAAGAGCGCTGATGATCCTCCCATAAAAATTGAAGTTGCTGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCCAATCTGGTGAAACTAGTGGGATACTGTGCTGAGGATGATGAAAGAGGAATCCAGAGACTTCTGATTTATGAATACATGCCCAACATAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTCCCATGGATGTTGGAAATGGTGACTCAGGTTGTGGAGTCTTCTGTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTAGAAGCTTCTCAGGGTACTACTGAAATAAAGAACAATAAAATGACCATGGATCAAAAACCAGATTGCTGTAATTGGTTAAGAATGTGGAGGCCAAAGCTTTTAAGAGCATGTAGATTGTTGTAG 735 0.4218 MKCFTFYFGEKKDGPKSMQSLSGQSNSSTYVEAEMRRSGSELNSMDASDNSTDSLRRTAFPSLSQKPSNLRVFTVSELKTATKSFSRSVMLGEGGFGCVYKGLIKSADDPPIKIEVAGHKEWVTEVNVLGIVEHPNLVKLVGYCAEDDERGIQRLLIYEYMPNISVEHHLSPRSETPLPWMLEMVTQVVESSVSTNPQPPLKSVEASQGTTEIKNNKMTMDQKPDCCNWLRMWRPKLLRACRLL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0442 244 PANTHER OS01G0588500 PROTEIN-RELATED 12 180 - -
Aed8g0442 244 SUPERFAMILY Protein kinase-like (PK-like) 61 189 IPR011009 -
Aed8g0442 244 ProSiteProfiles Protein kinase domain profile. 85 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0442 244 PANTHER KINASE 1B 12 180 - -
Aed8g0442 244 Pfam Protein tyrosine and serine/threonine kinase 90 189 IPR001245 GO:0004672|GO:0006468
Aed8g0442 244 MobiDBLite consensus disorder prediction 17 34 - -
Aed8g0442 244 Gene3D Phosphorylase Kinase; domain 1 63 160 - -
Aed8g0442 244 SMART tyrkin_6 85 244 IPR020635 GO:0004713|GO:0006468
Aed8g0442 244 MobiDBLite consensus disorder prediction 12 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0442 Aed-Chr8 3678405 3682639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0442 23 180 Trihelix Transcription Factor Family AT1G70460 37.654 1.75e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed8g0442 PK_Tyr_Ser-Thr 1.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0442 - - gmx:100305438 326.635