Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0429 ATGCTTAGGAATTTTGCCGTGAGGATTCAAAAGGGTCTTTCACTGTTTGTAGCTAGAAGGCATGCATCATTCAGCTACTTCAGTAGTGAAGATCGTGCCGCCGCAACCGATGATGTTGTTATGGAAGGCTATTTTTCTGTTCTTGCAATGAAGGGTGAGGAAACTAAGAGATTTGTTGTTGGTTTAGACTACTTGAATGATCCTGCATTCATGGTACTTCTGGACCAAGCTCGTGAAGAGTATGGTTTCAGACACCAAGGAGCTCTTGCACTCCCTTGTCGCCCTCAAGAACTACAGAAGATTCTAGATGCTCCCAAAGCATAG 324 0.4414 MLRNFAVRIQKGLSLFVARRHASFSYFSSEDRAAATDDVVMEGYFSVLAMKGEETKRFVVGLDYLNDPAFMVLLDQAREEYGFRHQGALALPCRPQELQKILDAPKA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0429 107 Pfam Auxin responsive protein 21 103 IPR003676 GO:0009733
Aed8g0429 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 106 - -
Aed8g0429 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0429 Aed-Chr8 3560786 3561109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0429 40 102 Calmodulin-binding Proteins AT3G43120 41.270 1.35e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0429 - K14488 gmx:100818734 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0429 8 3560786 3561109 Aed8g0429 8 3560786 3561109 ECH
Aed2g1868 2 23367631 23368017 Aed8g0429 8 3560786 3561109 PCT